PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028113560.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family Nin-like
Protein Properties Length: 289aa    MW: 32374.6 Da    PI: 7.087
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028113560.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK39.79.3e-13111155448
          RWP-RK   4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 
                     ei l+d+ ++  ++ ++AA +L+v+ ++L r CR+yG +RWP Rk
  XP_028113560.1 111 EIPLDDILQNSTKSSQAAADDLKVSRSALNRVCRRYGFPRWPPRK 155
                     68899999999*********************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MKKNFQTFKL ASGEELGEHL CIEEISFQNG EKLDSVQMPQ TTKSLPRLEP LQSGGEMTQL  60
DSSNQQSIDA LSNGSNIVSA ERCNIDVTCS QEKGKTRRPK RVYNRTGVKI EIPLDDILQN  120
STKSSQAAAD DLKVSRSALN RVCRRYGFPR WPPRKKNMVG QSQPSESSRG VDHQQISQLS  180
FDLPFNQAST TVVHANPHNI AIEDANIVTM RAKYMNDITI KFQLSLSSGL VELQQQIAKR  240
LHLEAGSYYV KYKDEEDHVI LIACDDDLQD CISTYRLLGT SIVVSIDPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.17e-17Nin-like family protein