PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028113434.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | FAR1 | ||||||||
Protein Properties | Length: 256aa MW: 29693.6 Da PI: 7.5328 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 57.1 | 6.1e-18 | 31 | 101 | 1 | 72 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek 72 +fYn+Y+ +vGFs+rk++ +k+k+++e+t+rtfvC+keg+r +k++ + +r+e r+gC a++ ++k + XP_028113434.1 31 DFYNTYGGKVGFSIRKAYAHKNKQTKETTSRTFVCYKEGTRGIDKRD-PLVKFSRQEVRCGCGARFSIRKIS 101 6*******************************************999.88899***************9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MEENNVVDEL ANCGWKPKLG MPFDSEQAAY DFYNTYGGKV GFSIRKAYAH KNKQTKETTS 60 RTFVCYKEGT RGIDKRDPLV KFSRQEVRCG CGARFSIRKI STIQAIEVEL ASESGIPLKA 120 AYELFDRESG GRASLGFTKL DQKNYLRSKR QKDLEYRETG SVLQYFHKKI LENPSFYYAV 180 HLDYEELISN IFWADTQMIM DYAQFGDVVT FDITYKLNNE HRLFGTFVGF NHHQETVIFS 240 AALMYDKTTE SFTWLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 2e-44 | FAR1 family protein |