PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028113356.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WRKY

Protein Properties

Length: 520aa MW: 57061.3 Da PI: 6.1166

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028113356.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	75.2	8.1e-24	214	270	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 DgynWrKYGqK+v++ + +rsYY+Ct+ +C +kk +e +++ ++v+ei+ +g+Hnh+ XP_028113356.1 214 TDGYNWRKYGQKQVRSPQGSRSYYKCTFCDCLAKK-IEFCDHSNRVIEIISKGQHNHD 270 6******************************98.*******************7 PP
2	WRKY	99.1	2.7e-31	384	440	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dgy+WrKYGqK+vkg+++pr+YYrCtsagCpv+k++er+ +++++v+itY+g H+h+ XP_028113356.1 384 DGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIERAVDNTTAVIITYKGIHDHD 440 9*******************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 520 aa Download sequence
MDEKQSFEAL KQQEPVKKTI PHEEQGGGGE DEDEEFDEVD DDDDDGGAEG EVGGEQRKQL 60 SELPPIETRY GASQSETLAS ASSENDLPSD FHTSSHLLSE VPVDYALLRP LVSTEFKDQI 120 GVSQQQALVS VTTEAAQTKS HNQLQSPGCL TSSPELSPTS VTQSISSAPS PTHLDKKLSP 180 VVNTNSARMP HVEKHDSANP KPISSVRVVK TPSTDGYNWR KYGQKQVRSP QGSRSYYKCT 240 FCDCLAKKIE FCDHSNRVIE IISKGQHNHD PPWGINCTRE SRLALPAAPN STAHPVRMLN 300 DSDPSTSSRE LIQETPVLPE TKHQDSIGSD GSTEIDIKEE HVDEPEPKRR LKKSNSSYSG 360 SSFKPGKKPK FIVHAAGDVG ISGDGYRWRK YGQKMVKGNP HPRNYYRCTS AGCPVRKHIE 420 RAVDNTTAVI ITYKGIHDHD MPVPKKRHGP PSAPLVAAAA PASMNLQFKK TEAIANQISA 480 TQWSVDTEGE LTSETLDTGE EKAMESARTL LSIGFEIKQC

Sequence ? help Back to Top

Protein Sequence Length: 520 aa Download sequence

MDEKQSFEAL KQQEPVKKTI PHEEQGGGGE DEDEEFDEVD DDDDDGGAEG EVGGEQRKQL  60
SELPPIETRY GASQSETLAS ASSENDLPSD FHTSSHLLSE VPVDYALLRP LVSTEFKDQI  120
GVSQQQALVS VTTEAAQTKS HNQLQSPGCL TSSPELSPTS VTQSISSAPS PTHLDKKLSP  180
VVNTNSARMP HVEKHDSANP KPISSVRVVK TPSTDGYNWR KYGQKQVRSP QGSRSYYKCT  240
FCDCLAKKIE FCDHSNRVIE IISKGQHNHD PPWGINCTRE SRLALPAAPN STAHPVRMLN  300
DSDPSTSSRE LIQETPVLPE TKHQDSIGSD GSTEIDIKEE HVDEPEPKRR LKKSNSSYSG  360
SSFKPGKKPK FIVHAAGDVG ISGDGYRWRK YGQKMVKGNP HPRNYYRCTS AGCPVRKHIE  420
RAVDNTTAVI ITYKGIHDHD MPVPKKRHGP PSAPLVAAAA PASMNLQFKK TEAIANQISA  480
TQWSVDTEGE LTSETLDTGE EKAMESARTL LSIGFEIKQC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30935.1	1e-108	WRKY family protein