PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028112831.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 735aa    MW: 80467.1 Da    PI: 6.256
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028112831.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS335.97.2e-1033807342374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     +++L+++Ae v++g+  laq++Larl+++ s  g+p++R+a+  +eAL+  +++         p+ ++s+ n + ++aa+k fse+sP+l+f+++
  XP_028112831.1 380 IDQLFKAAELVQTGNSVLAQSILARLNHQLSAIGKPFHRAAFLCKEALQLLITN---------PSAANSPFNLIFKIAAYKSFSEISPLLQFANF 465
                     689**************************************************9.........556666667*********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlel 191
                     t+Nqa+lea++g +r+Hi+Dfdi++G+QW++L+q+La R+ g+psl+iT+++sp+++++ el  t+e+L++fA+e+++ fef++l  ++l++ + 
  XP_028112831.1 466 TCNQALLEALDGFDRIHIVDFDIGYGGQWASLMQELALRSTGAPSLKITAFASPSTHDQLELGLTRENLNHFASEINMAFEFDILSLDSLHSASS 560
                     *********************************************************************************************** PP

            GRAS 192 eeL..rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     ++L  +v+++Ea+aVnl +  ++ +  ++sl+     ++++vk+lsPk+vv v++ +d+++ +F +++++al+ ys l++sl+a    + ++ +k
  XP_028112831.1 561 WSLpiHVSENEAIAVNLPIGSFSNY--QLSLPL----IVRFVKQLSPKIVVSVDRGCDRTDLPFPNHVIHALQSYSNLLESLDAV-NVNLDALQK 648
                     **9667888**********888777..566666....99*******************************************665.3566999** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +Er+ll++ i+++v+ + ++     e+  +Wr  + ++GF+p+++s+++++qa++++++++++g++ve++  sl+l+W++++L+s+SaWr
  XP_028112831.1 649 IERFLLQPGIEKIVMGRYRS----PEKTLHWRTLFLSSGFSPLTFSNFTESQAECVVKRTPVRGFHVEKRPSSLLLCWQQKELISASAWR 734
                     ****************9999....9999*************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 735 aa     Download sequence    
MIRMQYNLKE KGVLEVGDFD SEAKWKKKEG SFASNEPISV LDTRRSPSPS TSTSTSTLSS  60
SLGGGGVGSS SGSTDNTASL AAVSGNNLWP PERGPADLAA ACGGRKDEWA SELQPIPVGL  120
EVSGGERFGL GLEDWESLLS ESAAASPSQE QSVIRWIMGD VDDPSMGLNK LLQSGGGGAQ  180
PPEFEFHGGF GVVDQGFGLD MVSSVGNFMG SINPSLPTSG FSQEKLSLPP NTPILTNYKL  240
PNPQNPNLFS PGLFNPPQQC QQQQPPLECS DVKPQIFNPP LLINHHQAHH TQNPSFFLPF  300
PHTHQEHHLM PPQKRHNPGG GGLEQISKGP FSDSMLHQQP QGLSHQLQLL PNYLQQRPTM  360
SMKPKFEAAD EMGQQQQGII DQLFKAAELV QTGNSVLAQS ILARLNHQLS AIGKPFHRAA  420
FLCKEALQLL ITNPSAANSP FNLIFKIAAY KSFSEISPLL QFANFTCNQA LLEALDGFDR  480
IHIVDFDIGY GGQWASLMQE LALRSTGAPS LKITAFASPS THDQLELGLT RENLNHFASE  540
INMAFEFDIL SLDSLHSASS WSLPIHVSEN EAIAVNLPIG SFSNYQLSLP LIVRFVKQLS  600
PKIVVSVDRG CDRTDLPFPN HVIHALQSYS NLLESLDAVN VNLDALQKIE RFLLQPGIEK  660
IVMGRYRSPE KTLHWRTLFL SSGFSPLTFS NFTESQAECV VKRTPVRGFH VEKRPSSLLL  720
CWQQKELISA SAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-147GRAS family protein