PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028112541.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | WRKY | ||||||||
Protein Properties | Length: 235aa MW: 26611.1 Da PI: 9.5994 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 102.4 | 2.6e-32 | 158 | 216 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk++ +prsYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+ XP_028112541.1 158 LDDGYKWRKYGQKVVKNTLHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHAHS 216 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MLNQGLFEDQ EMSTQMGFFS FAPNMSMPPI HGSGCHHQSL KTLTTIPSSP TLAAADVPSS 60 NPSETLLSSS ATSKQRQDFT THLGGPQLSL QRSSANLWAW GEVNECMSYK RSGSGGDDHL 120 GISAVNMKMK MKMKKIKGRR KVREPRFCFK TMSDVDVLDD GYKWRKYGQK VVKNTLHPRS 180 YYRCTQDNCR VKKRVERLAE DPRMVITTYE GRHAHSPSHD EDDAQAPSQL NNFFW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39410.1 | 8e-55 | WRKY family protein |