PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028112469.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 263aa    MW: 29945.1 Da    PI: 6.1729
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028112469.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH49.39e-1678130155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++ +hn+ Er RR++iNs ++ Lr+llP a   + kKls  +++ ++ +YI +Lq
  XP_028112469.1  78 KKLNHNASERDRRKKINSLYSSLRSLLPAA--DQTKKLSIPTTVSHVLKYIPELQ 130
                     6789*************************6..48888***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MLALSSSMFS TFGWPLEEDL ISHEQHNNNN NTIFYIEAET SDQSFLHFPP PPNLSQPLAN  60
SSEFKLSNEV FGDATMAKKL NHNASERDRR KKINSLYSSL RSLLPAADQT KKLSIPTTVS  120
HVLKYIPELQ SELERLVLKK EELISRINSR QREDLLSHID IEKKRKCATG SPLSAVSASP  180
LGDREFVIQI CTVKLNNSPL SEILLNLEMD YGLLLLNASC FESFGERVFY NLHLQVQGNQ  240
RVEIETLREK LLFLYEKSGE LFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.12e-54bHLH family protein