PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028112382.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 328aa    MW: 36204.4 Da    PI: 5.5018
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028112382.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.73.9e-20173223255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp+ +g   r++lg+f+ta eAaka+++a+ k++g
  XP_028112382.1 173 HYRGVRRRP-WGKFAAEIRDPKRRG--SRVWLGTFDTAIEAAKAYDRAAFKMRG 223
                     69*******.**********96554..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MATQDEFTAL ELIKQHLFGE LSPIASSVTD LSNTSSIFTS FDCSSSVKTE VTTSQSDSLC  60
SQTSSCESSN VISNFLNSNE VNMTYLFDFV PKSINFEHNG TDFFEFESKP QIIDLTSPNS  120
SSLSSSSLSS IDRRPSLKLD LPPGKKFEWL EFGEPAKPVV SGQKSSTTEE RQHYRGVRRR  180
PWGKFAAEIR DPKRRGSRVW LGTFDTAIEA AKAYDRAAFK MRGSKAILNF PLEAGKSYGA  240
ATAAENGDKK RSREVAETTE ERPVKKEKSP ESDVSAVSSS MTNCPLTPSS WTAVWEWEDQ  300
QGNGIFNVPP LSPLSPHPLL GFPQLMVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.11e-45ERF family protein