PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028112381.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 212aa MW: 23477.6 Da PI: 8.0346 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.5 | 4.6e-20 | 108 | 158 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp++ng +r++lg+f tae+Aa a+++a+ +++g XP_028112381.1 108 HYRGVRQRP-WGKFAAEIRDPTKNG--ARVWLGTFETAEDAAVAYDRAAYRMRG 158 8********.***********9998..*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 212 aa Download sequence |
MMMCTQNDFD ADFALLESIS RQLLSNDSES NSWNSLFTCL GDNWGELPLK ENDSEDMLVY 60 GLLNEAATVG WLPSLTAATT TSATVKLEPQ ICNFGSPPLP VVPSKGKHYR GVRQRPWGKF 120 AAEIRDPTKN GARVWLGTFE TAEDAAVAYD RAAYRMRGSR ALLNFPLRIN SGEPEPVRVT 180 SKRSAVATAE SRSPKRRRKV VETAVIEPKV EV |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 194 | 200 | PKRRRKV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G47220.1 | 1e-61 | ERF family protein |