PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028112290.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | SBP | ||||||||
Protein Properties | Length: 189aa MW: 21256.6 Da PI: 9.0923 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 135.3 | 1.8e-42 | 61 | 138 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+e+C++dl++ak+yhrrhkvCe+h+ka+vv+v+g++qrfCqqCsrfhelsefDe+krsCrrrLa+hnerrrk+++ XP_028112290.1 61 ICQAENCTTDLADAKQYHRRHKVCEHHAKAQVVMVAGIRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKNTS 138 5**************************************************************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence |
MEFGKQRGGM NMMKDKVKME AAADGDDFDK DDNNDDFVNA SKDDKKKRAS GGGGGGSSMR 60 ICQAENCTTD LADAKQYHRR HKVCEHHAKA QVVMVAGIRQ RFCQQCSRFH ELSEFDEAKR 120 SCRRRLAGHN ERRRKNTSDS HAEGSSHKGT GTGIGTHQLN ETVSGQVDER GRIQISMQEN 180 ATYKHFHIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15270.1 | 4e-46 | SBP family protein |