PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028112243.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TALE

Protein Properties

Length: 404aa MW: 45366.2 Da PI: 6.5135

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028112243.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.2	1.6e-09	326	363	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ L++++gLt++qV++WF N R + XP_028112243.1 326 FEHflHPYPNDSEKLMLSSQTGLTKNQVSNWFINARVR 363 664459******************************88 PP
2	BELL	109	2.9e-35	187	258	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+++lq k++kL+slleeV++rY+qy++ql+ v+ssFe++ag+g+ k+Yt+lAl+a+SrhF +L+dai++qi XP_028112243.1 187 ENHDLQVKIVKLISLLEEVERRYEQYYHQLEGVVSSFEMIAGVGTGKSYTALALQAMSRHFCSLRDAITSQI 258 6899*******************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MSRSLDLVQG TPMAEESTIN QSRHLMDLLG ASNETNHQAQ RLSLSLNSDM LVPSVQFRQR 60 PLNSNVFSPN YFISGEEARE ACNPRMDRST TDEFSFVASP FASSSTSLNQ SCSGSYGTES 120 FHIAVGNSKY LKPAQVLLEE VVNVGGKAVD LQNEKFLRRL SRNGRRGSLG FCSELKAELC 180 STGLSGENHD LQVKIVKLIS LLEEVERRYE QYYHQLEGVV SSFEMIAGVG TGKSYTALAL 240 QAMSRHFCSL RDAITSQIIA AKRKISQEMP KISTGLSQLS LFDNEARHNR LLSPQQLGMM 300 QCQRQAWRPI RGLPETSVTI LRSWLFEHFL HPYPNDSEKL MLSSQTGLTK NQVSNWFINA 360 RVRLWKPMIE EMYKEEFADS SADSDSLLGS CSIPREGMTD HDEE

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MSRSLDLVQG TPMAEESTIN QSRHLMDLLG ASNETNHQAQ RLSLSLNSDM LVPSVQFRQR  60
PLNSNVFSPN YFISGEEARE ACNPRMDRST TDEFSFVASP FASSSTSLNQ SCSGSYGTES  120
FHIAVGNSKY LKPAQVLLEE VVNVGGKAVD LQNEKFLRRL SRNGRRGSLG FCSELKAELC  180
STGLSGENHD LQVKIVKLIS LLEEVERRYE QYYHQLEGVV SSFEMIAGVG TGKSYTALAL  240
QAMSRHFCSL RDAITSQIIA AKRKISQEMP KISTGLSQLS LFDNEARHNR LLSPQQLGMM  300
QCQRQAWRPI RGLPETSVTI LRSWLFEHFL HPYPNDSEKL MLSSQTGLTK NQVSNWFINA  360
RVRLWKPMIE EMYKEEFADS SADSDSLLGS CSIPREGMTD HDEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75430.1	1e-101	TALE family protein