PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028112242.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TALE

Protein Properties

Length: 468aa MW: 52426.9 Da PI: 6.457

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028112242.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.9	1.9e-09	390	427	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ L++++gLt++qV++WF N R + XP_028112242.1 390 FEHflHPYPNDSEKLMLSSQTGLTKNQVSNWFINARVR 427 664459******************************88 PP
2	BELL	108.7	3.6e-35	251	322	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+++lq k++kL+slleeV++rY+qy++ql+ v+ssFe++ag+g+ k+Yt+lAl+a+SrhF +L+dai++qi XP_028112242.1 251 ENHDLQVKIVKLISLLEEVERRYEQYYHQLEGVVSSFEMIAGVGTGKSYTALALQAMSRHFCSLRDAITSQI 322 6899*******************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
MASQDSPPNP ASSILHQFII SDSIANQTQF ENQHFDAYRT DLRGGGTHHQ SHGVLSSIQF 60 LGERMSRSLD LVQGTPMAEE STINQSRHLM DLLGASNETN HQAQRLSLSL NSDMLVPSVQ 120 FRQRPLNSNV FSPNYFISGE EAREACNPRM DRSTTDEFSF VASPFASSST SLNQSCSGSY 180 GTESFHIAVG NSKYLKPAQV LLEEVVNVGG KAVDLQNEKF LRRLSRNGRR GSLGFCSELK 240 AELCSTGLSG ENHDLQVKIV KLISLLEEVE RRYEQYYHQL EGVVSSFEMI AGVGTGKSYT 300 ALALQAMSRH FCSLRDAITS QIIAAKRKIS QEMPKISTGL SQLSLFDNEA RHNRLLSPQQ 360 LGMMQCQRQA WRPIRGLPET SVTILRSWLF EHFLHPYPND SEKLMLSSQT GLTKNQVSNW 420 FINARVRLWK PMIEEMYKEE FADSSADSDS LLGSCSIPRE GMTDHDEE

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

MASQDSPPNP ASSILHQFII SDSIANQTQF ENQHFDAYRT DLRGGGTHHQ SHGVLSSIQF  60
LGERMSRSLD LVQGTPMAEE STINQSRHLM DLLGASNETN HQAQRLSLSL NSDMLVPSVQ  120
FRQRPLNSNV FSPNYFISGE EAREACNPRM DRSTTDEFSF VASPFASSST SLNQSCSGSY  180
GTESFHIAVG NSKYLKPAQV LLEEVVNVGG KAVDLQNEKF LRRLSRNGRR GSLGFCSELK  240
AELCSTGLSG ENHDLQVKIV KLISLLEEVE RRYEQYYHQL EGVVSSFEMI AGVGTGKSYT  300
ALALQAMSRH FCSLRDAITS QIIAAKRKIS QEMPKISTGL SQLSLFDNEA RHNRLLSPQQ  360
LGMMQCQRQA WRPIRGLPET SVTILRSWLF EHFLHPYPND SEKLMLSSQT GLTKNQVSNW  420
FINARVRLWK PMIEEMYKEE FADSSADSDS LLGSCSIPRE GMTDHDEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75430.1	1e-100	TALE family protein