PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028112089.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 591aa    MW: 66274.5 Da    PI: 4.7948
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028112089.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS445.34e-1362225912374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     ++lL++cA ++s+g+ ++a++l++ l++++s +gdp qR+aay++eALaar+a s+++ly+al+++e +   s ++l+++++++ev+P+++f+++
  XP_028112089.1 222 KQLLFNCAAMISEGNVAEASTLINDLRQRVSIQGDPSQRIAAYMVEALAARVATSGKGLYEALKCKEPP---SNDRLSSMQVLFEVCPCFRFGFM 313
                     589*****************************************************************9...9********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                     +aN aI ea++ e+++Hi+Dfdi+qG Q+++L+q+La+ p++ p+lR+Tgv++pes+      l+ +g+rL+++A++l+vpfef++ va +++++
  XP_028112089.1 314 AANGAIIEAFKDEKKIHIVDFDINQGSQYITLIQTLAKLPGKLPRLRLTGVDDPESVqrAVGGLNLIGQRLKELAKTLDVPFEFQA-VAAKTAAV 407
                     *******************************************************99878889***********************.7999**** PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     ++++L+ + gEal Vn+++qlh+++desvs+ ++rd++L++vksl+Pk+v+vveqe+++n+++Fl+rf+ea +yysa+fdslea+lpres++r +
  XP_028112089.1 408 TPSMLDRQAGEALLVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQEMNTNTAPFLTRFVEAYSYYSAVFDSLEATLPRESQDRLN 502
                     *********************************************************************************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     vE+++l+r+ivn+vaceg+er+er e ++kWr+r+++aGF + p+se++ + ++ l++++ ++ ++v+ee g+l +gW+d+ L+++SaWr
  XP_028112089.1 503 VEKQCLARDIVNIVACEGEERIERYEVAGKWRARMMMAGFAACPISENVSDVIRKLIKQYCER-FKVKEETGALHFGWEDKILTVASAWR 591
                     *************************************************************66.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 591 aa     Download sequence    
MSLVRSQDQF ARSYGNPKLY ALNESSDDSS ISTPIFNSDK HKIMYETESY SSESYDPKYF  60
LDSPTEEFMH SSNSADSVNR FHPQGVSSYN HRMAGSRPVM TAQNPFNSFV GIRHQDGYRP  120
NFESEYLEGK SPNAIDYDED KMRLKLQELE RALLDDNNNV EDDDDDAFGT DQSMEIDSEW  180
ANPICNTLLH DSPKESSSSD SNLTTISSNK EISLTSSPAT PKQLLFNCAA MISEGNVAEA  240
STLINDLRQR VSIQGDPSQR IAAYMVEALA ARVATSGKGL YEALKCKEPP SNDRLSSMQV  300
LFEVCPCFRF GFMAANGAII EAFKDEKKIH IVDFDINQGS QYITLIQTLA KLPGKLPRLR  360
LTGVDDPESV QRAVGGLNLI GQRLKELAKT LDVPFEFQAV AAKTAAVTPS MLDRQAGEAL  420
LVNFAFQLHH MPDESVSTVN QRDQLLRMVK SLNPKLVTVV EQEMNTNTAP FLTRFVEAYS  480
YYSAVFDSLE ATLPRESQDR LNVEKQCLAR DIVNIVACEG EERIERYEVA GKWRARMMMA  540
GFAACPISEN VSDVIRKLIK QYCERFKVKE ETGALHFGWE DKILTVASAW R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21450.10.0GRAS family protein