PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028111928.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 214aa MW: 25017.6 Da PI: 9.9317 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 92.8 | 1.7e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien +nrqvt+skRrngi+KKA+EL vLCda+v++i+fs+tgk++ey + XP_028111928.1 9 KRIENATNRQVTYSKRRNGIMKKAQELTVLCDAKVSLIMFSNTGKFHEYTT 59 79***********************************************75 PP | |||||||
2 | K-box | 76.7 | 5.9e-26 | 71 | 175 | 1 | 98 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqre......qRhll.GedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelq 88 yqk+ g +l+++++e++q +l+kLk+ +++L+re +R+++ GedL++Ls++eL Leq++ sl+ +R++K+++l++q+e+ +kk ++++ XP_028111928.1 71 YQKTLGIDLWSTHYERMQGHLKKLKEINNKLRREigvcgwHRQRVgGEDLNDLSIQELCGLEQKMAASLTDVRQRKYHVLKTQTETYKKKVRSME 165 78899999************************663344446887736************************************************ PP K-box 89 eenkaLrkkl 98 e++ +L ++ XP_028111928.1 166 ERHGNLLLNF 175 ***9997666 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MGRGKIEIKR IENATNRQVT YSKRRNGIMK KAQELTVLCD AKVSLIMFSN TGKFHEYTTP 60 NITTKKIYDQ YQKTLGIDLW STHYERMQGH LKKLKEINNK LRREIGVCGW HRQRVGGEDL 120 NDLSIQELCG LEQKMAASLT DVRQRKYHVL KTQTETYKKK VRSMEERHGN LLLNFEAKCE 180 DPQFGTLFEN DRDYDYAFRL HHGGGFGSNE LRLA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54340.1 | 1e-64 | MIKC_MADS family protein |