PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028111819.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ARR-B | ||||||||
Protein Properties | Length: 252aa MW: 28327.6 Da PI: 5.0676 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 80.6 | 1.8e-25 | 202 | 251 | 1 | 51 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 kpr++WtpeLH++Fv av+q+ G ++A+Pk+ile+m+v gLt+e+v+SHLQ XP_028111819.1 202 KPRMVWTPELHQQFVAAVNQI-GLKNAVPKKILEVMNVSGLTRENVASHLQ 251 79*******************.9**************************** PP | |||||||
2 | Myb_DNA-binding | 38.7 | 2.3e-12 | 204 | 251 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwq 45 r+ WT+e+++++v av+q G + +k+I + m+ g+t++++ s++q XP_028111819.1 204 RMVWTPELHQQFVAAVNQIGLKnaVPKKILEVMNvSGLTRENVASHLQ 251 789*******************9************************9 PP | |||||||
3 | Response_reg | 77.8 | 3.9e-26 | 23 | 129 | 1 | 107 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl vdD+ + +++l+++l+ +y ev++++++++al +l++ + +D+++ D+ mp+mdG++ll+ i e +lp+++++a +e++ + + + G XP_028111819.1 23 VLAVDDDCTCLQILAKMLQTCRY-EVTTCSSAQDALSILRQGKskFDIVISDVHMPDMDGFKLLEIICLEM-DLPVVMMSADDENDVVMKGIIDG 115 799********************.***************888888**********************8865.9********************** PP ESEEEESS--HHHH CS Response_reg 94 akdflsKpfdpeel 107 a d+l+Kp+ +e++ XP_028111819.1 116 ACDYLVKPVRMEAI 129 ********999987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MSVTKEKHST CTTNLEFPAG LRVLAVDDDC TCLQILAKML QTCRYEVTTC SSAQDALSIL 60 RQGKSKFDIV ISDVHMPDMD GFKLLEIICL EMDLPVVMMS ADDENDVVMK GIIDGACDYL 120 VKPVRMEAIK YLWKHVVRKQ KYGLKAIEQS KNEDNDEIMN QKQLNAESHI TSMDTKNCGS 180 SNCEKDEEEE GKDKDDSVSL KKPRMVWTPE LHQQFVAAVN QIGLKNAVPK KILEVMNVSG 240 LTRENVASHL QV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 6e-89 | ARR-B family protein |