PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028111633.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 274aa MW: 31009.7 Da PI: 9.6476 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 30.2 | 1.1e-09 | 235 | 273 | 3 | 48 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48 +GV++ k+ +W A I++ +k+++lg+ g+ e Aa+++++ XP_028111633.1 235 MRGVYF--KNMKWQAAIKVD-----KKQIYLGTVGSQEAAARLYDR 273 79**98..47*********4.....5******************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence |
MDDTEETEII LSLSLSLSIT GPSSHFTKKM KTNMRTKIVD HSPPFHRSQI KEPYLSPIRR 60 SQKSKQSCHQ KSKPRLKSIN HQKFLGDILE DPANEPNKDT YMMTIEPEDA PNQPEYVQIG 120 MVSGLPVSVN GKEFSPASLL SELNEIGGHI IFVLFKNLTM MSFIDCMVDP RTCINVTPCI 180 VQLGKTILNV SPGSSNASGS SSSKEQHNQQ YPVPEVKCRK RHQRKHFENQ KPCLMRGVYF 240 KNMKWQAAIK VDKKQIYLGT VGSQEAAARL YDRM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.2 | 4e-22 | ERF family protein |