PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028111463.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | NF-YC | ||||||||
Protein Properties | Length: 206aa MW: 23231.1 Da PI: 5.4883 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 172.5 | 4.6e-54 | 38 | 139 | 1 | 99 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 ql++fw++q ie+++dfknh+lPlarikki+kadedv+misaeaP+l+skacelfilelt+rsw+haeenkrrtl+ +dia+a+trtdifdfl XP_028111463.1 38 QLQMFWTYQrqeIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPMLFSKACELFILELTIRSWIHAEENKRRTLQNNDIATAITRTDIFDFL 132 89*****998899********************************************************************************** PP NF-YC 93 vdivprd 99 vdivpr+ XP_028111463.1 133 VDIVPRE 139 *****98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MDNNQPPPTA AQSSSYPPQP PYHHHHLHLL LQQQQQQQLQ MFWTYQRQEI EQVNDFKNHQ 60 LPLARIKKIM KADEDVRMIS AEAPMLFSKA CELFILELTI RSWIHAEENK RRTLQNNDIA 120 TAITRTDIFD FLVDIVPREI KEEGVEIVGS TATGVPYYHP PAAGGVDPGV HVPPSQAWQS 180 VWQTAVEDWS YGGGGSGGQV NLDGQG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48590.1 | 3e-81 | NF-YC family protein |