PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028111115.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WRKY

Protein Properties

Length: 457aa MW: 49708.1 Da PI: 7.1109

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028111115.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	106.9	1e-33	236	292	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDg+nWrKYGqK+vkgse+prsYY+Ct+ +Cpvkkkver+ d++v+ei+Y+g+Hnh+ XP_028111115.1 236 DDGFNWRKYGQKQVKGSEYPRSYYKCTHLNCPVKKKVERAL-DGQVTEIIYKGQHNHQ 292 8**************************************.*************8 PP
2	WRKY	33.6	7.6e-11	411	431	1	21
---SS-EEEEEEE--TT-SS- CS WRKY 1 ldDgynWrKYGqKevkgsefp 21 ldDgy+WrKYGqK+vkg+++p XP_028111115.1 411 LDDGYRWRKYGQKVVKGNPYP 431 59******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MAENEGSLPR ASSAPLRPTI MLPPRSSMEN LFTAGPGASP GPMTLVSNFF SENDPDSDCR 60 SFSQLLAGAM SSPAAVSGHR PSFPPPPLAE DSSSKDKNGD FDFRFKQNRP SGLMIAQAPM 120 FTIPPGLSPA SLLESPGWFS PGQGPFGISH RQALAQVTAQ AVQAQSQTLA HAEFPSISAA 180 PATSLTQSSS FTSNVTSQQQ MPPSMPDPGI TKESSDRSHS DLRSQPSSFI ADKPADDGFN 240 WRKYGQKQVK GSEYPRSYYK CTHLNCPVKK KVERALDGQV TEIIYKGQHN HQPPQKRAKD 300 TGNPNSYLNH QGNYESAVEG QTGFLNKSKE AANSLSLKGQ ESSQATQDHL SGSSDSEEVG 360 DAETRVNRRD EDEPEAKKRN TEVRVSEPAS SNRAVTEPRI IVQTTSEVDL LDDGYRWRKY 420 GQKVVKGNPY PSLCSTKVAA SVLVLIYERH HVDIMNV

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MAENEGSLPR ASSAPLRPTI MLPPRSSMEN LFTAGPGASP GPMTLVSNFF SENDPDSDCR  60
SFSQLLAGAM SSPAAVSGHR PSFPPPPLAE DSSSKDKNGD FDFRFKQNRP SGLMIAQAPM  120
FTIPPGLSPA SLLESPGWFS PGQGPFGISH RQALAQVTAQ AVQAQSQTLA HAEFPSISAA  180
PATSLTQSSS FTSNVTSQQQ MPPSMPDPGI TKESSDRSHS DLRSQPSSFI ADKPADDGFN  240
WRKYGQKQVK GSEYPRSYYK CTHLNCPVKK KVERALDGQV TEIIYKGQHN HQPPQKRAKD  300
TGNPNSYLNH QGNYESAVEG QTGFLNKSKE AANSLSLKGQ ESSQATQDHL SGSSDSEEVG  360
DAETRVNRRD EDEPEAKKRN TEVRVSEPAS SNRAVTEPRI IVQTTSEVDL LDDGYRWRKY  420
GQKVVKGNPY PSLCSTKVAA SVLVLIYERH HVDIMNV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13960.1	1e-129	WRKY family protein