PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028110783.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 333aa MW: 37520.2 Da PI: 7.3039 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.2 | 3.3e-17 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEd++l+ ++ +G g+W+++++ +g+ R++k+c++rw +yl XP_028110783.1 13 RGLWSPEEDKKLITYISSHGHGCWSSVPKLVGLQRCGKSCRLRWINYL 60 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.5 | 5.7e-17 | 66 | 109 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T++E+ +++d+++ lG++ W+ Ia++++ gRt++++k++w++ XP_028110783.1 66 RGSFTEQEERIIIDVHRILGNR-WAQIAKHLP-GRTDNEVKNFWNS 109 89********************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 333 aa Download sequence |
MGHHCCSKQK VKRGLWSPEE DKKLITYISS HGHGCWSSVP KLVGLQRCGK SCRLRWINYL 60 RPDLKRGSFT EQEERIIIDV HRILGNRWAQ IAKHLPGRTD NEVKNFWNSC IKKKLISLGL 120 DPNTHNLLSP HQTTTNATKY SHNNQKQQNT SAFSITSHGN DASMDTKTPF ATFPSLPSSH 180 TSSTSTNPNN PISLYENSTI TTASTFEYQS PRNQIVNSLM HASLHQLVSE PCIKFARRPL 240 MERTQFLSST SNPSGFGAID ENCMWGTNSE PLGVMQPQQE KTCEGDQMDE VDINMDNSLI 300 ESSNFDFEFV ESGLLPCGMY CNVSPMDQLA WDC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12720.1 | 1e-82 | MYB family protein |