PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028110741.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family HSF
Protein Properties Length: 314aa    MW: 35084.1 Da    PI: 5.1571
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028110741.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind116.51.6e-36251162102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+y++++d+++++lisw+e+g++f+v+ + efa+++LpkyFkh+nf+SFvRQLn+YgF+kv  ++         weF+++ Fk+g+k ll++
  XP_028110741.1  25 FLTKTYQLVDDPSVDDLISWNEDGTTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFANECFKRGEKVLLRD 110
                     9*****************************************************************99.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k 
  XP_028110741.1 111 IQRRKI 116
                     ***985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MAPMPVEQTG ESASGESQRT LPTPFLTKTY QLVDDPSVDD LISWNEDGTT FIVWRPAEFA  60
RDLLPKYFKH NNFSSFVRQL NTYGFRKVVP DRWEFANECF KRGEKVLLRD IQRRKISPAA  120
AAAATSVAQT VTVAVPPATL AASPVNSGDE QVLSSNSSPT ATATAAPVVH RGTITNCTTA  180
PEILEENERL RKENAQLNQE VNGFRGLYNN ILSLMTNYGV QGGRALDLMP EREIPGESNG  240
GAKLEERLLF SPRLFGVSIG AKRLRRSDDE EGQNNGEDQV RQKQTRPDVK SEPFDRRNEN  300
HHQEDEEAPW LDKI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11660.11e-92HSF family protein