PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028110698.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

SBP

Protein Properties

Length: 1037aa MW: 114993 Da PI: 6.729

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028110698.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	125	3.2e-39	156	233	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C++dl++ k+yh rhkvC++hska ++lv +++qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrkk++ XP_028110698.1 156 VCQVDDCRVDLTNSKDYHIRHKVCDMHSKAGSALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKKHP 233 6**************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1037 aa Download sequence
MEEAQFGGKV HHLCGPVMPD LKAAGKKGVE WDLNDWKWDG DLFTAAPPLN SVPSDCRSRQ 60 LFSLVSEIPI NPGLSNTSLA CSDETNLGND KGKRVLEKRR RVVVVEDEEE CNDEARSLNL 120 KLGGQVYPIT QAEMENSEGR CGKKSKVVAT SSNCSVCQVD DCRVDLTNSK DYHIRHKVCD 180 MHSKAGSALV GNVMQRFCQQ CSRFHVLQEF DEGKRSCRRR LAGHNKRRRK KHPENVVNGV 240 SLNDEHGSSY LLVSLLRILA NMHTNSLDQT KDQDMLSHLL RNLTSMSGSI NGRNISGLLP 300 GSQDLQKATM SLGTPEKVPD LISNGPKCSS MLGSISKMDV CIDIQDSLRP NGQCMAFEGT 360 EKRTFTDNTQ GGLFQTPCAI PYPARDCIPT KASAPDNGVG RMKLKDIDLN TVYDGSEDCS 420 ENLESYHAPV NLGIGSLDCT LRGHHGGQES SPPQTSGNTG STSTQSLSSS SREAQSRTDR 480 IVFKLFGKDP SDFPLVLRKQ ILDWLSHSPT EIESYIRPGC IILTIYLRLG KSTWEELYCD 540 LNSSLTRLLD ASNDSFWRTG WMYTRVQQRV AFIYDGQVVL DTLLPLKSHK NSRILSIKPV 600 AVSFSERTQF LVKGFNLSQS TTRLLCALEG KYLVQESCSD MMEGVDTFVD GNEIQCLSFS 660 CSIPNVSGRG FIEVEDHSFS NSFFPFIVTE QDVCSEICTL ESAIEVAEIA DDIHAESEMV 720 EARNNALDFI HEMGWLLHRS QLKFRLGSMD PNLDLFPFER FRWLMEFSME HDWCAVVKKL 780 LGIVFNGTVD AGGHSSIELA LLDMGLLHRA VRRNCRSMVE VLLRYIPTDV VDKPVSEQQQ 840 HVNRGSNFLF RPDAIGPGGL TPLHIAASSD GSESVLDALT DDPGSVGIEA WKGARDSTGL 900 TPNDYACLRS YYSYIHLVQK KINKKSGNGH VVLDIPGALL EYNITQKLTD GYKTAKVASL 960 DTEKNELKPI QRHCKACQQK MAYGSCRTSV AIYRPAMLSL LAIAAVCVCA ALLFKSPPKV 1020 VCVLQPFIWE RLKYGAI

Sequence ? help Back to Top

Protein Sequence Length: 1037 aa Download sequence

MEEAQFGGKV HHLCGPVMPD LKAAGKKGVE WDLNDWKWDG DLFTAAPPLN SVPSDCRSRQ  60
LFSLVSEIPI NPGLSNTSLA CSDETNLGND KGKRVLEKRR RVVVVEDEEE CNDEARSLNL  120
KLGGQVYPIT QAEMENSEGR CGKKSKVVAT SSNCSVCQVD DCRVDLTNSK DYHIRHKVCD  180
MHSKAGSALV GNVMQRFCQQ CSRFHVLQEF DEGKRSCRRR LAGHNKRRRK KHPENVVNGV  240
SLNDEHGSSY LLVSLLRILA NMHTNSLDQT KDQDMLSHLL RNLTSMSGSI NGRNISGLLP  300
GSQDLQKATM SLGTPEKVPD LISNGPKCSS MLGSISKMDV CIDIQDSLRP NGQCMAFEGT  360
EKRTFTDNTQ GGLFQTPCAI PYPARDCIPT KASAPDNGVG RMKLKDIDLN TVYDGSEDCS  420
ENLESYHAPV NLGIGSLDCT LRGHHGGQES SPPQTSGNTG STSTQSLSSS SREAQSRTDR  480
IVFKLFGKDP SDFPLVLRKQ ILDWLSHSPT EIESYIRPGC IILTIYLRLG KSTWEELYCD  540
LNSSLTRLLD ASNDSFWRTG WMYTRVQQRV AFIYDGQVVL DTLLPLKSHK NSRILSIKPV  600
AVSFSERTQF LVKGFNLSQS TTRLLCALEG KYLVQESCSD MMEGVDTFVD GNEIQCLSFS  660
CSIPNVSGRG FIEVEDHSFS NSFFPFIVTE QDVCSEICTL ESAIEVAEIA DDIHAESEMV  720
EARNNALDFI HEMGWLLHRS QLKFRLGSMD PNLDLFPFER FRWLMEFSME HDWCAVVKKL  780
LGIVFNGTVD AGGHSSIELA LLDMGLLHRA VRRNCRSMVE VLLRYIPTDV VDKPVSEQQQ  840
HVNRGSNFLF RPDAIGPGGL TPLHIAASSD GSESVLDALT DDPGSVGIEA WKGARDSTGL  900
TPNDYACLRS YYSYIHLVQK KINKKSGNGH VVLDIPGALL EYNITQKLTD GYKTAKVASL  960
DTEKNELKPI QRHCKACQQK MAYGSCRTSV AIYRPAMLSL LAIAAVCVCA ALLFKSPPKV  1020
VCVLQPFIWE RLKYGAI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	98	102	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	0.0	SBP family protein