PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028110429.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family SBP
Protein Properties Length: 1033aa    MW: 114638 Da    PI: 6.6978
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028110429.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP128.72.1e-40153230178
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     +Cqve+C++dl++ak+yhrrhkvC++hska+ +lv +++qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++
  XP_028110429.1 153 VCQVEDCQVDLTNAKDYHRRHKVCDMHSKATRALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHP 230
                     6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence    Length: 1033 aa     Download sequence    
MEAQFGGKAY HLYGPVIPNL KAVGKKSMEW DLNDWKWDGD LLTAAPLNSV PSDCRSRQLF  60
PVVSEIPINT ALSKSSSSCS EETNLGNEKG KRALEKRRRV VVVEDEEFND GAGSLNLKLG  120
GQVYPITEAE MEKSVGKCGK KSKVVASTSN RAVCQVEDCQ VDLTNAKDYH RRHKVCDMHS  180
KATRALVGNV MQRFCQQCSR FHVLQEFDEG KRSCRRRLAG HNKRRRKTHP ENVVSGGSLN  240
DEHGSSYLLI SLLRILSNMH TNSSDQTKDQ DLLSHLLSNL SSLAGSINGT NLSGLLPGSQ  300
DSHNAATCLP TPEKVSDLIS NGPQYNSVLA STSKMDDCID IQDPLRPNGQ CATVSAFEGT  360
EKRTSANNTQ DGLLPTPYAI PCPMRDGIPA KASVPENGMG RIKLNDIDLN TVYDDSQDCA  420
ENLEGYHAPV NLGIGSLDCT LWVPHGSQKS SPPQMSGISG STSTQSPSSS SGEAQSRTDR  480
IVFKLFGKDP SDFPLVLRKQ ILDWLSHSPT EIESYIRPGC IILTIYLRLG KSTWEELYCD  540
LSSSLTRLLD ASIDSFWRTG WVYTRVQQRA AFIYDGQIVL DTLLPLKCHK NRSILSIKPI  600
AVSFSERAQF LVRGFNLSRS NTRLLCALEG KYLVQESCSD VMEVGDTFVD GDEIQCLSFS  660
CSIPNVTGRG FIEVEDQSLS NSFFPFIVTE QDVCSEICTL ESAIEVAEIA DDIHAESEMI  720
KARNNAMDFI HEMGWLLHRS QLKFRLDHMD PNLDLFSFKR FRWLMEFSIE HDWCAVVKKL  780
LGFAFNGTVD AGEHSSIELA LLDMSLLHRA VRRNCRSMVE VLLRYIPDGV IDKPGSEQKQ  840
HVNVFRPDAI GPGGLTPLHI AAGIDGSESV LDALTDDPGS VGIEAWKGAR DSMGMTPNDY  900
ACLRGYHSYI HLVQMKINRK KSGNGHVVLE IPGALLESNI KQKLMDVHKS LKVASFHTEK  960
NEMKPIQRDC RLCQQKMPYG SYRTSLATYR PAMLSMVAIA AVCVCVALLF KSSPEVDYVF  1020
EPFIWERLKY GSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
196100KRRRV
2223229KRRRKTH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60030.10.0SBP family protein