PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028110429.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | SBP | ||||||||
Protein Properties | Length: 1033aa MW: 114638 Da PI: 6.6978 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 128.7 | 2.1e-40 | 153 | 230 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C++dl++ak+yhrrhkvC++hska+ +lv +++qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ XP_028110429.1 153 VCQVEDCQVDLTNAKDYHRRHKVCDMHSKATRALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHP 230 6**************************************************************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1033 aa Download sequence |
MEAQFGGKAY HLYGPVIPNL KAVGKKSMEW DLNDWKWDGD LLTAAPLNSV PSDCRSRQLF 60 PVVSEIPINT ALSKSSSSCS EETNLGNEKG KRALEKRRRV VVVEDEEFND GAGSLNLKLG 120 GQVYPITEAE MEKSVGKCGK KSKVVASTSN RAVCQVEDCQ VDLTNAKDYH RRHKVCDMHS 180 KATRALVGNV MQRFCQQCSR FHVLQEFDEG KRSCRRRLAG HNKRRRKTHP ENVVSGGSLN 240 DEHGSSYLLI SLLRILSNMH TNSSDQTKDQ DLLSHLLSNL SSLAGSINGT NLSGLLPGSQ 300 DSHNAATCLP TPEKVSDLIS NGPQYNSVLA STSKMDDCID IQDPLRPNGQ CATVSAFEGT 360 EKRTSANNTQ DGLLPTPYAI PCPMRDGIPA KASVPENGMG RIKLNDIDLN TVYDDSQDCA 420 ENLEGYHAPV NLGIGSLDCT LWVPHGSQKS SPPQMSGISG STSTQSPSSS SGEAQSRTDR 480 IVFKLFGKDP SDFPLVLRKQ ILDWLSHSPT EIESYIRPGC IILTIYLRLG KSTWEELYCD 540 LSSSLTRLLD ASIDSFWRTG WVYTRVQQRA AFIYDGQIVL DTLLPLKCHK NRSILSIKPI 600 AVSFSERAQF LVRGFNLSRS NTRLLCALEG KYLVQESCSD VMEVGDTFVD GDEIQCLSFS 660 CSIPNVTGRG FIEVEDQSLS NSFFPFIVTE QDVCSEICTL ESAIEVAEIA DDIHAESEMI 720 KARNNAMDFI HEMGWLLHRS QLKFRLDHMD PNLDLFSFKR FRWLMEFSIE HDWCAVVKKL 780 LGFAFNGTVD AGEHSSIELA LLDMSLLHRA VRRNCRSMVE VLLRYIPDGV IDKPGSEQKQ 840 HVNVFRPDAI GPGGLTPLHI AAGIDGSESV LDALTDDPGS VGIEAWKGAR DSMGMTPNDY 900 ACLRGYHSYI HLVQMKINRK KSGNGHVVLE IPGALLESNI KQKLMDVHKS LKVASFHTEK 960 NEMKPIQRDC RLCQQKMPYG SYRTSLATYR PAMLSMVAIA AVCVCVALLF KSSPEVDYVF 1020 EPFIWERLKY GSS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 96 | 100 | KRRRV |
2 | 223 | 229 | KRRRKTH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60030.1 | 0.0 | SBP family protein |