PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028110279.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 300aa MW: 33637.2 Da PI: 7.5033 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 44.2 | 4.9e-14 | 42 | 91 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr + +Wv+e+r+ps+ + r++lg+f ++e+Aa a++ a ++l+g XP_028110279.1 42 IYRGVRKRN-GDKWVCEVREPSK---KSRIWLGTFPSPEMAATAHDIADLALRG 91 69****887.8*********864...6*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 300 aa Download sequence |
MTFEDESCAS SSSPSSPTNE PPSIPQKRKA GRKKFKETRH PIYRGVRKRN GDKWVCEVRE 60 PSKKSRIWLG TFPSPEMAAT AHDIADLALR GKKARLNFPD SAEALPRPRS SSPRDIQLAA 120 RAFLPRKVLG AYKSCHKNDA EHSQEMRAPL LCDSQPHNYS APFLWHDFCV PSLSLLSSSK 180 FSNDTSFISS VVRPSSTSFQ HVKCQENLLL EPPLADSSSI EIESHEMVVE PFSSDLTCFK 240 GSEKVLDQSM TVFVDEEAMF NMPGLLDSMA EGLLLTPPAM KRGFNWGDMA SDMDFTLWRY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51990.1 | 5e-42 | ERF family protein |