PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028110037.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | bHLH | ||||||||
Protein Properties | Length: 323aa MW: 35846.9 Da PI: 6.0494 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.6 | 2.6e-09 | 54 | 103 | 1 | 54 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r++ + rE+ RRdr+N+ f L l ++ +K++Ka+iL+ +++ +k+L XP_028110037.1 54 RKVQKADREKLRRDRLNEHFLDLGNALDPD----RPKNDKATILTDTIQVLKDL 103 5677889********************997....79***************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 323 aa Download sequence |
MDQWETNDFS QPLDSNHVPT TTSVHCTLLH PLPNSLPEPR QMPEVEVKDP IAARKVQKAD 60 REKLRRDRLN EHFLDLGNAL DPDRPKNDKA TILTDTIQVL KDLTAEVNRL KAECAALSEE 120 SRELTQEKNE LRGEKASLKS DIDNLNLQYQ QRLAAMFPWT TIDPSVVMAS PFSYPVPLTV 180 PPGPIPMHHP AMQPFPFFGN QNPGAIPNSC STFIPYPSLA NHHIDQPSYQ CASTSRISSK 240 QDSKCKISDH CRGSNDDKSD DSNDVVTELE LKTPGSTVQQ EQSPGERKSK KPLRKGKSIV 300 DGSSSSGYSS SQGFQDSSSN NTQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19860.2 | 4e-71 | bHLH family protein |