PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028110002.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WRKY

Protein Properties

Length: 463aa MW: 51218.6 Da PI: 7.6737

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028110002.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.8	7.2e-31	267	325	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++++++tYeg+Hnh+ XP_028110002.1 267 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDQTILTTTYEGNHNHP 325 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MDTACDRIID KRDDRRVYSP GISGEKRIMD FFADHNNSCK KPLRVDVKKE STANDGESSR 60 GFTELDTGLN LLTANAESDK SVVVDETSPN IKEKISTNKL AVLQAEMDRM STENQRLKSA 120 LNQMNNNYYA LQMHVAALME HRQQIRKTTT VEEKQMIDVT EKRVVARQFM DLGQAAIVER 180 DDPSQSLSEE RTQDCSGSPQ TNVSVMNDLQ KNSGDEIAAF DPTKCDRRDE QRFGRGKSPD 240 VAEQTREAAM RRVRVSVRAR SEAAMISDGC QWRKYGQKMA KGNPCPRAYY RCTMAVGCPV 300 RKQVQRCAED QTILTTTYEG NHNHPLPPAA MTMASTTSAA ATMFLSGSMP SSDGLLNSRT 360 LLSCPPNMAT ISASAPFPTI TLDLTNSPNP SQFHRPQGQF HIPFPNIPQN FSSGPQILSQ 420 ALYNQSKFSG VQSSQDIMSA ITTDPNFTAA LVAAITSFMG NVQ

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MDTACDRIID KRDDRRVYSP GISGEKRIMD FFADHNNSCK KPLRVDVKKE STANDGESSR  60
GFTELDTGLN LLTANAESDK SVVVDETSPN IKEKISTNKL AVLQAEMDRM STENQRLKSA  120
LNQMNNNYYA LQMHVAALME HRQQIRKTTT VEEKQMIDVT EKRVVARQFM DLGQAAIVER  180
DDPSQSLSEE RTQDCSGSPQ TNVSVMNDLQ KNSGDEIAAF DPTKCDRRDE QRFGRGKSPD  240
VAEQTREAAM RRVRVSVRAR SEAAMISDGC QWRKYGQKMA KGNPCPRAYY RCTMAVGCPV  300
RKQVQRCAED QTILTTTYEG NHNHPLPPAA MTMASTTSAA ATMFLSGSMP SSDGLLNSRT  360
LLSCPPNMAT ISASAPFPTI TLDLTNSPNP SQFHRPQGQF HIPFPNIPQN FSSGPQILSQ  420
ALYNQSKFSG VQSSQDIMSA ITTDPNFTAA LVAAITSFMG NVQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	9e-99	WRKY family protein