PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028109927.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 363aa MW: 41219.9 Da PI: 5.009

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028109927.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	176.7	6.4e-55	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv +yLk+kveg+++el evi+ vd+yk++Pw+Lp k + +++ ew+fF++rd+ky++g+r+nratk+gyWkatgkd++v+ XP_028109927.1 6 LPPGFRFHPTDEELVGYYLKRKVEGQEIEL-EVIPVVDLYKFDPWELPeKsFLPKRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKVV 99 79**************************.99**********95344555788*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++++g +ktLvfy+grap g +tdWvmheyrl XP_028109927.1 100 C-QSSVTGYRKTLVFYRGRAPMGDRTDWVMHEYRL 133 .9999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MGGASLPPGF RFHPTDEELV GYYLKRKVEG QEIELEVIPV VDLYKFDPWE LPEKSFLPKR 60 DMEWFFFCPR DRKYPNGSRT NRATKAGYWK ATGKDRKVVC QSSVTGYRKT LVFYRGRAPM 120 GDRTDWVMHE YRLSDDLSQG SPCFQGGYAL CRVIKRNDNV QKTSDKQVGN SSNNGDFTST 180 RISSEPVMIS EDMTFQSSHL CNGSNFSSPV TSPYQTMPIV ENDTFSMGTN RSSVWVSPDL 240 ILDSSKEYPQ GQGVFGYYLQ HKFPNMMTQW PPHNQYEISP SSSYSNFTEE IEVGDDLSRF 300 GCISPYSSGH TNYMGFCGNE DNMPYEGFET WDQATIHRQG SGDGSLGELG GLWSQEDNMV 360 IVM

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MGGASLPPGF RFHPTDEELV GYYLKRKVEG QEIELEVIPV VDLYKFDPWE LPEKSFLPKR  60
DMEWFFFCPR DRKYPNGSRT NRATKAGYWK ATGKDRKVVC QSSVTGYRKT LVFYRGRAPM  120
GDRTDWVMHE YRLSDDLSQG SPCFQGGYAL CRVIKRNDNV QKTSDKQVGN SSNNGDFTST  180
RISSEPVMIS EDMTFQSSHL CNGSNFSSPV TSPYQTMPIV ENDTFSMGTN RSSVWVSPDL  240
ILDSSKEYPQ GQGVFGYYLQ HKFPNMMTQW PPHNQYEISP SSSYSNFTEE IEVGDDLSRF  300
GCISPYSSGH TNYMGFCGNE DNMPYEGFET WDQATIHRQG SGDGSLGELG GLWSQEDNMV  360
IVM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17980.1	1e-101	NAC family protein