PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028109565.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C3H
Protein Properties Length: 369aa    MW: 41008.2 Da    PI: 8.377
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028109565.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH20.96.2e-07146166526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C  f++ G+C  Gd+C FaHg
  XP_028109565.1 146 ACTEFRK-GQCVKGDSCEFAHG 166
                     7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    
MPSLTSRPKQ RRERTTTTMM MMMINNGDTT RSNPTVQVPP WTHIDDPTVN MPSPFSSITS  60
NDTPTTFDAV TAALRRYLPS NTADFHGEDC DIPVDAFACD HFRMFEFKVR KCARGRSHDW  120
TECPYAHPGE KARRRDPRKF HYSGTACTEF RKGQCVKGDS CEFAHGVFEC WLHPARYRTQ  180
PCKDGTQCRR RVCFFAHTPD QLRVLPTSPR MSDSFDGSAG RLGFDSYLAN GSPPVSPPSD  240
SPPMSPNSVS ELAASMRSLQ IGKVNMNMSQ PAFGFQIGSG FCSPRSPSTL RPAFRSLPTT  300
PTQTVTRSGL GVFDLWEQTC EEEPVMERVE SGRGVRAKIY AKLSKENSLG RGDSAGPGPD  360
IGWVSELIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.11e-119C3H family protein