PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028109473.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 758aa    MW: 85739.3 Da    PI: 6.0865
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028109473.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS365.19.7e-1123867561374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     +++lL++c + v+++d++ a++lL +++ ++sp+gd  qR+a+yf++ L+arl++++s   +al+    ++++ +++l+a+klf  ++P+++ sh
  XP_028109473.1 386 MRNLLIQCMQSVANNDHQSARKLLRQIRWRSSPRGDGSQRMAHYFANSLEARLVGTGSLENRALA----ASMSYVDVLKAYKLFLSTFPFMESSH 476
                     5799***************************************************4433333333....334589******************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + a q+++e +++ + +Hii f+++ G+QW++L+q L++R++g+p+lRiTg++ p+ g   + +++etg+rLak++e+++vpfe+n  +a+++e+
  XP_028109473.1 477 FFATQMVMEQAAKVTSLHIIHFGAMSGVQWIPLIQRLSTRAGGSPKLRITGIDFPQVGfrPAARVNETGSRLAKYCEKFNVPFEYNG-IAQKWET 570
                     ********************************************************9999***************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++e+L ++++E l+Vn+ ++l+++lde+  ++s+rd+vL+l+ +++P+++++   + ++ns+ F+ rf eal ++sa+fd+lea++pre++er+
  XP_028109473.1 571 VNVEDLGIEKDELLVVNCLYHLMHILDETIMQHSPRDAVLNLILRINPDIFIHGIVNGNYNSPFFVSRFREALFHFSAFFDMLEANVPRENHERM 665
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     + Er + g+ei nvvaceg er+er et+++W+ r+ +aGFk++pl+++++kq+++ ++  + + + v++ s++++ gWk+r+L+++S+W+
  XP_028109473.1 666 VFERDIWGKEILNVVACEGLERTERPETYKHWQIRMLRAGFKQLPLNQEIVKQIRTRVKSNYHKDFFVDDASQWMLSGWKGRALFALSCWK 756
                     **************************************************************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 758 aa     Download sequence    
MDSFLWAFPD SKNGYECNHG SVSAYSDSNV VKGFQLKDTS LDYNVVDLPL TSNVSDPVIH  60
CTDVSNRLDR DSADENGFSD AVLRFVNQVL MEDDSEDKDC TIQDSTLHAA EKSFYEILNE  120
KYPSLPSQPL HHDDPSSSSD DSITHCCSNC SGSSISPNNS IESSMITDLH KYESSQIHNP  180
YIDHTLPTNS QSFCSSGSSG HTGLVESLLN PVLESRSSWQ FNKGIEETVK ILSLEKNGNL  240
VDQFYSEASK SGSSLTYFEN QGLTHPVSKE KVLKVKPDPE KDEVDLPDSS LLKGRKNHHR  300
EESDLEEGRS NKHLAVYTEE SVLHEMFDKV LSLYGNNAES GLNPRDGGAF LNGSSWESQQ  360
NELTKGLNCE MIYAKKGVSK REAVDMRNLL IQCMQSVANN DHQSARKLLR QIRWRSSPRG  420
DGSQRMAHYF ANSLEARLVG TGSLENRALA ASMSYVDVLK AYKLFLSTFP FMESSHFFAT  480
QMVMEQAAKV TSLHIIHFGA MSGVQWIPLI QRLSTRAGGS PKLRITGIDF PQVGFRPAAR  540
VNETGSRLAK YCEKFNVPFE YNGIAQKWET VNVEDLGIEK DELLVVNCLY HLMHILDETI  600
MQHSPRDAVL NLILRINPDI FIHGIVNGNY NSPFFVSRFR EALFHFSAFF DMLEANVPRE  660
NHERMVFERD IWGKEILNVV ACEGLERTER PETYKHWQIR MLRAGFKQLP LNQEIVKQIR  720
TRVKSNYHKD FFVDDASQWM LSGWKGRALF ALSCWKPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-166GRAS family protein