PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028109417.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family WRKY
Protein Properties Length: 312aa    MW: 34423.8 Da    PI: 6.125
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028109417.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.42e-30147205259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+++ gC ++k+vers++dp ++++tY+ eHnh+
  XP_028109417.1 147 SDTWSWRKYGQKPIKGSPYPRGYYRCSTSkGCLARKQVERSRSDPGTFIVTYTAEHNHP 205
                     79************************9988****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MADDNWDLHA VVRGCATTSS TTTTSDSYTP SIFQALDDHR FRFFADPFEE AKTSSVEDLN  60
DLFKPFFPKI SLQKQQPPQI KPFSSPPLSV LHGFQDLSSP LLPPPPPQQR QHHQSQHQKQ  120
SASTHTTSSR KNQMKRVCEV PAEGLSSDTW SWRKYGQKPI KGSPYPRGYY RCSTSKGCLA  180
RKQVERSRSD PGTFIVTYTA EHNHPMPTHR NSLAGTTRQK TTAGGGSGET HQPTCSSPVS  240
PASVSPATEK MVEDEDDDEF DVSDTVVGDD FFEGLEELTE TFAGDRFSDQ FPGSLAYPWV  300
AKNATTTAGG DG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.14e-55WRKY family protein