PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028109416.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | WRKY | ||||||||
Protein Properties | Length: 316aa MW: 34951.4 Da PI: 6.5837 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.3 | 2e-30 | 151 | 209 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+++ gC ++k+vers++dp ++++tY+ eHnh+ XP_028109416.1 151 SDTWSWRKYGQKPIKGSPYPRGYYRCSTSkGCLARKQVERSRSDPGTFIVTYTAEHNHP 209 79************************9988****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 316 aa Download sequence |
MADDNWDLHA VVRGCATTSS TTTTSDSYTP SIFQALDDHR FRFFADPFEE AKTSSVEDLN 60 DLFKPFFPKI SLQKQQPPQI KPFSSPPLSV LHGFQDLSSP LLPPPPPQQR QHHQSQHQKQ 120 SASTHTTSSR SRKRKNQMKR VCEVPAEGLS SDTWSWRKYG QKPIKGSPYP RGYYRCSTSK 180 GCLARKQVER SRSDPGTFIV TYTAEHNHPM PTHRNSLAGT TRQKTTAGGG SGETHQPTCS 240 SPVSPASVSP ATEKMVEDED DDEFDVSDTV VGDDFFEGLE ELTETFAGDR FSDQFPGSLA 300 YPWVAKNATT TAGGDG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01250.1 | 1e-51 | WRKY family protein |