PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028109128.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 536aa MW: 61603.4 Da PI: 4.4999 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49 | 1.5e-15 | 72 | 126 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ngkr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +g+WvAeIr+ ++ + + +r +lg+f ta +Aa +++a++ l+g XP_028109128.1 72 CVYRGVRQRT-WGKWVAEIREpICKtR--KpRRLWLGTFSTAVDAALSYDKAARVLYG 126 68*****999.**********665523..68**********************98876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 536 aa Download sequence |
MLSEVVYKKQ RKRRRNAFES IEQTLLEWKN NRSQNQSNSS EEIEAKRRRK FPVKGLRKGC 60 MQGKGGPENL GCVYRGVRQR TWGKWVAEIR EPICKTRKPR RLWLGTFSTA VDAALSYDKA 120 ARVLYGSDAI LNFPSSQTDL ITKSTTMLGN CVVDEEEKVV KQECSDAMLS FPGNQTERME 180 LSKELDSITK STVSEPDNEM LIKLEDKMSE DSKISEDCET EELKVVKIEV TVKEFKPIIE 240 VVTPTKSEIA KEKIAETTRE SESCSIEDDN NVEHGCLQHV KEETVITDFE PSRPIGSDEF 300 EPGQDGKCHS GKIRSYDEGK LQCEMPSDDS YRLQDLKENC FSTDETSDTK TFGATMVRQD 360 WLCGSDHFNY CYDPMIFKEQ LHYLETFLME DKFESQPQWP NSPLENGNEC EFFGNWLTDE 420 SGGTELSQVD SKDGSKEGIR DFDYWSQSPE AQNYMCNYEP NSELQQERKF DDFGPYVFLS 480 DSKLQRKRPH GVAYEFSHSQ GTKHSDNVVE TLTTEEYNCD CDFLNVDLIE DYGLLD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 11 | 15 | RKRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40340.1 | 1e-33 | ERF family protein |