PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028108889.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TCP

Protein Properties

Length: 320aa MW: 35986.9 Da PI: 6.7268

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028108889.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	101	2.1e-31	52	162	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......................ssssasec 73 g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl+ ak++i+el+ + XP_028108889.1 52 FGGKDRHSKVCTVKGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNVAKHEIDELPPLqmpnfgqnhqtlvanlgdkeglkI------- 139 689*************************************************************555444444333333333333330....... PP TCP 74 eaesssssasnsssg.....................k 89 + + XP_028108889.1 140 --------------NnsldwddqlglarskeveteiA 162 ..............03333444444333222222210 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MITTSRESEF TTKQEEGNTV DHGKKSKGSS SSSITTWSRL NDPRIVRVSR AFGGKDRHSK 60 VCTVKGLRDR RVRLSVPTAI QLYDLQDRLG LNQPSKVVDW LLNVAKHEID ELPPLQMPNF 120 GQNHQTLVAN LGDKEGLKIN NSLDWDDQLG LARSKEVETE IADEKQDWNQ RNEEEKQECL 180 ESHGANASPN KFFPKSNHSS IPGLLNNVMP YNPFYRWDPS NFPFSQTEDS QNFNVVPLPS 240 TLSQVLVYPP GTTQSYFPSH EFDPKQISHF QMLSSSSQNP LSNSLAPTLY SLGQSMKPKL 300 VPSQNSGGSQ SNNNDEFPQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02150.2	1e-47	TCP family protein