PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028108804.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 282aa MW: 31541.3 Da PI: 6.6221 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.3 | 1.8e-18 | 160 | 209 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ r r++lg+f aeeAa+a+++a+ +++g XP_028108804.1 160 QYRGVRQRP-WGKWAAEIRDPK----RaVRVWLGTFERAEEAARAYDRAAVEFRG 209 6********.**********83....57**********************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 282 aa Download sequence |
MLLLTHTHST VLSTLSLFPN FFSLYNNTPL KMDKFYKRPQ NLENGAEGSS TGTPPPLHLT 60 QEQELFIMVS ALKHVISGSP TTNAEPATSL SLASLSGTKV DQNCHVISIP DVDTCRLCKI 120 NGCLGCDYFA PITCGNDGFK NPVSTASGGG GEKRKKKKNQ YRGVRQRPWG KWAAEIRDPK 180 RAVRVWLGTF ERAEEAARAY DRAAVEFRGD KAKTNFPISD YQSNNQNSHH QSNAGEMEKR 240 SEMQSCNSGT TLEMGNDENE IGEDMIYEEE LREWMEMDFT TR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34410.1 | 4e-32 | ERF family protein |