PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028108527.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 476aa    MW: 53543.5 Da    PI: 6.5644
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028108527.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS437.31.1e-133464701374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cA+ v++g+ e+a+  L+ +s+laspdgd+mqR+aayfteALa r+++ +++l kal++++ s  + see+ +++lf+e++P+l++s+
  XP_028108527.1  46 LIQLLVACANQVAAGSVENANIGLEYISHLASPDGDTMQRIAAYFTEALADRMLKGWPGLHKALNSTKIS--SISEEILVQRLFFELFPFLRLSY 138
                     689*************************************************************999998..59********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +++NqaI ea++ge+ vHiiD++  +++QW++Llq L +Rpegpp+lRiTg+++    +ke le +++ L++ Ae+l++pf+f++ ++++le+l+
  XP_028108527.1 139 VITNQAIIEAMDGEKVVHIIDLNCFEPAQWINLLQLLKARPEGPPHLRITGIHE----HKEVLELMAHCLNEEAEKLDIPFQFHP-IVSKLENLD 228
                     ******************************************************....9**************************.7999***** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrll..............................................................desvslese 223
                     +e Lrvk+gEala+++vlqlh+ll                                                               +s+    +
  XP_028108527.1 229 FECLRVKTGEALAISSVLQLHSLLafdddmlrrnspsasknlnsavhlqrvlqtnpltlgdflekdvvnfyspspdsassssplcfGSSG----K 319
                     ***************************************************************************999985544444444....5 PP

            GRAS 224 rdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrer 318
                       ++L+++++lsPk++vv+eqe++hn++s+++r++eal++y alfd+le +++r+s er+kvE++l+g+ei+n+vaceg er+erhe+lekW  r
  XP_028108527.1 320 MGTFLNALRGLSPKLMVVTEQESNHNAHSLMDRVTEALNFYGALFDCLELTISRTSVERQKVEKMLFGEEIKNIVACEGIERKERHEKLEKWIPR 414
                     666******************************************************************************************** PP

            GRAS 319 leeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     le aGF+ vp+s++   qa +ll+  + +gy+++ee+g+lv++W+drpL+s+SaWr
  XP_028108527.1 415 LEFAGFGRVPISYHGRLQATRLLQSNGYNGYKLKEEKGCLVICWQDRPLFSISAWR 470
                     *******************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 476 aa     Download sequence    
MGQEKGSSSV SSSPLQYFSL MTLSPGIGSP FPWHREMKSE ERGLTLIQLL VACANQVAAG  60
SVENANIGLE YISHLASPDG DTMQRIAAYF TEALADRMLK GWPGLHKALN STKISSISEE  120
ILVQRLFFEL FPFLRLSYVI TNQAIIEAMD GEKVVHIIDL NCFEPAQWIN LLQLLKARPE  180
GPPHLRITGI HEHKEVLELM AHCLNEEAEK LDIPFQFHPI VSKLENLDFE CLRVKTGEAL  240
AISSVLQLHS LLAFDDDMLR RNSPSASKNL NSAVHLQRVL QTNPLTLGDF LEKDVVNFYS  300
PSPDSASSSS PLCFGSSGKM GTFLNALRGL SPKLMVVTEQ ESNHNAHSLM DRVTEALNFY  360
GALFDCLELT ISRTSVERQK VEKMLFGEEI KNIVACEGIE RKERHEKLEK WIPRLEFAGF  420
GRVPISYHGR LQATRLLQSN GYNGYKLKEE KGCLVICWQD RPLFSISAWR FRMYSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein