PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028108526.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | GRAS | ||||||||
Protein Properties | Length: 476aa MW: 53543.5 Da PI: 6.5644 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 437.3 | 1.1e-133 | 46 | 470 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 l++lL++cA+ v++g+ e+a+ L+ +s+laspdgd+mqR+aayfteALa r+++ +++l kal++++ s + see+ +++lf+e++P+l++s+ XP_028108526.1 46 LIQLLVACANQVAAGSVENANIGLEYISHLASPDGDTMQRIAAYFTEALADRMLKGWPGLHKALNSTKIS--SISEEILVQRLFFELFPFLRLSY 138 689*************************************************************999998..59********************* PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190 +++NqaI ea++ge+ vHiiD++ +++QW++Llq L +Rpegpp+lRiTg+++ +ke le +++ L++ Ae+l++pf+f++ ++++le+l+ XP_028108526.1 139 VITNQAIIEAMDGEKVVHIIDLNCFEPAQWINLLQLLKARPEGPPHLRITGIHE----HKEVLELMAHCLNEEAEKLDIPFQFHP-IVSKLENLD 228 ******************************************************....9**************************.7999***** PP GRAS 191 leeLrvkpgEalaVnlvlqlhrll..............................................................desvslese 223 +e Lrvk+gEala+++vlqlh+ll +s+ + XP_028108526.1 229 FECLRVKTGEALAISSVLQLHSLLafdddmlrrnspsasknlnsavhlqrvlqtnpltlgdflekdvvnfyspspdsassssplcfGSSG----K 319 ***************************************************************************999985544444444....5 PP GRAS 224 rdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrer 318 ++L+++++lsPk++vv+eqe++hn++s+++r++eal++y alfd+le +++r+s er+kvE++l+g+ei+n+vaceg er+erhe+lekW r XP_028108526.1 320 MGTFLNALRGLSPKLMVVTEQESNHNAHSLMDRVTEALNFYGALFDCLELTISRTSVERQKVEKMLFGEEIKNIVACEGIERKERHEKLEKWIPR 414 666******************************************************************************************** PP GRAS 319 leeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 le aGF+ vp+s++ qa +ll+ + +gy+++ee+g+lv++W+drpL+s+SaWr XP_028108526.1 415 LEFAGFGRVPISYHGRLQATRLLQSNGYNGYKLKEEKGCLVICWQDRPLFSISAWR 470 *******************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 476 aa Download sequence |
MGQEKGSSSV SSSPLQYFSL MTLSPGIGSP FPWHREMKSE ERGLTLIQLL VACANQVAAG 60 SVENANIGLE YISHLASPDG DTMQRIAAYF TEALADRMLK GWPGLHKALN STKISSISEE 120 ILVQRLFFEL FPFLRLSYVI TNQAIIEAMD GEKVVHIIDL NCFEPAQWIN LLQLLKARPE 180 GPPHLRITGI HEHKEVLELM AHCLNEEAEK LDIPFQFHPI VSKLENLDFE CLRVKTGEAL 240 AISSVLQLHS LLAFDDDMLR RNSPSASKNL NSAVHLQRVL QTNPLTLGDF LEKDVVNFYS 300 PSPDSASSSS PLCFGSSGKM GTFLNALRGL SPKLMVVTEQ ESNHNAHSLM DRVTEALNFY 360 GALFDCLELT ISRTSVERQK VEKMLFGEEI KNIVACEGIE RKERHEKLEK WIPRLEFAGF 420 GRVPISYHGR LQATRLLQSN GYNGYKLKEE KGCLVICWQD RPLFSISAWR FRMYSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50420.1 | 0.0 | GRAS family protein |