PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028108015.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 349aa    MW: 40493.2 Da    PI: 8.1541
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028108015.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR178.31.5e-2435124190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     +fYn+Y+ ++ Fs+r++  +k+k +++ ++r +vC+keg+r+ +k++   ++++raetrtgC+a+l vk+++ +gk++vt+++++HnH+l+
  XP_028108015.1  35 DFYNTYGGRIRFSIRRDFCRKNKFTNQLICRLLVCNKEGFRKVDKRD-PLTKNSRAETRTGCEARLYVKLDEgTGKFVVTDFKEKHNHDLV 124
                     6*******************************************999.999**************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MGFQLHFDMA MEPENDCAWK PKHGMTFDSE QSVYDFYNTY GGRIRFSIRR DFCRKNKFTN  60
QLICRLLVCN KEGFRKVDKR DPLTKNSRAE TRTGCEARLY VKLDEGTGKF VVTDFKEKHN  120
HDLVSPECAH MLPSQRKIST TQGIELDLAA QSGLRLGQSF ELMGKEAGGR QCLGFTKLDQ  180
KNYLRTKRQQ SLAYGEVGNM LQYFKEKSLQ NPSFFYAFQL DNEEQITNMF WADAQMIMDY  240
AQFGDVVTFD TTYKLNKEHR PFASFVGFNH HREIVTFGAT LLYDETAESF VWLFENFLEA  300
MSRKASKTLF SNQDAAMAKA IPIIMPDTSH RLCTWHLMQN ALKHVNCLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.17e-75FAR1 family protein