PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028107973.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 682aa MW: 77127.2 Da PI: 9.0025

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028107973.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	81.7	1.2e-25	57	146	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GFs+r+++ kk+k +++i++r++vC+keg+r+ +k++ ++++ra+tr+gC+a+l vk++ ++k++v++++++HnH+l+ XP_028107973.1 57 DFYNAYGARMGFSIRREYCKKNKVTNRIISRNLVCNKEGFRKVDKRD-PLTKNPRAKTRIGCEARLFVKLDVsTEKFVVIDFKEKHNHQLV 146 6*****************************************999.999****************99**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 682 aa Download sequence
MAVNINAPAP ATANQSPGKK AIQLQVLLLC FDMDMDNDCA WKPKEGMTFD SEESAYDFYN 60 AYGARMGFSI RREYCKKNKV TNRIISRNLV CNKEGFRKVD KRDPLTKNPR AKTRIGCEAR 120 LFVKLDVSTE KFVVIDFKEK HNHQLVSLDC AHMLPSQRKI SPTQAIELDL ASQSGLRLGQ 180 SFELMGREVD GRQSLGFLKV DQKNYLRTKR QKSLAYGEVV TFDTTYKLNK EHRPFASFVG 240 FNHHRETVVF GAALLYDETA ETFVWKKWGW AYVKSTWATG MSTTQLSESF NAFLKDYIRS 300 DFNLKEFFMH FERVLFEKRY KELEAGYALC QRLPRVRALF RMLSQMGNVY TKNIFEEFQD 360 EYFLSVESDI QAIEYGEGCT VYTIVDATGK NARKVKMEMD GSLACSCTKF ERKGILCSHC 420 LKVVRDILKL KEVPVQYVMK RWTKQARAEA IKDNLGNRIE VDVKLQQASR CKTLMTAFRA 480 VACKAAETEK TYDLAFSQVA ALDANVESKI SALFVTENEL SCNDQPQSLE VASQDNNHVI 540 QIPTGLKKKA PSNKGKRRIK GPCEVALEAS FKRKSRAKSL SSSQSVAVLT GTPSPLSVGG 600 DVYNDENVPP SVPPPLIYPT YNANNLPYCS EPSFMTLLQG GYDIAFQDSQ GSNTDSRATN 660 TLMCSQGIDG HKEMEGGRHF KF

Sequence ? help Back to Top

Protein Sequence Length: 682 aa Download sequence

MAVNINAPAP ATANQSPGKK AIQLQVLLLC FDMDMDNDCA WKPKEGMTFD SEESAYDFYN  60
AYGARMGFSI RREYCKKNKV TNRIISRNLV CNKEGFRKVD KRDPLTKNPR AKTRIGCEAR  120
LFVKLDVSTE KFVVIDFKEK HNHQLVSLDC AHMLPSQRKI SPTQAIELDL ASQSGLRLGQ  180
SFELMGREVD GRQSLGFLKV DQKNYLRTKR QKSLAYGEVV TFDTTYKLNK EHRPFASFVG  240
FNHHRETVVF GAALLYDETA ETFVWKKWGW AYVKSTWATG MSTTQLSESF NAFLKDYIRS  300
DFNLKEFFMH FERVLFEKRY KELEAGYALC QRLPRVRALF RMLSQMGNVY TKNIFEEFQD  360
EYFLSVESDI QAIEYGEGCT VYTIVDATGK NARKVKMEMD GSLACSCTKF ERKGILCSHC  420
LKVVRDILKL KEVPVQYVMK RWTKQARAEA IKDNLGNRIE VDVKLQQASR CKTLMTAFRA  480
VACKAAETEK TYDLAFSQVA ALDANVESKI SALFVTENEL SCNDQPQSLE VASQDNNHVI  540
QIPTGLKKKA PSNKGKRRIK GPCEVALEAS FKRKSRAKSL SSSQSVAVLT GTPSPLSVGG  600
DVYNDENVPP SVPPPLIYPT YNANNLPYCS EPSFMTLLQG GYDIAFQDSQ GSNTDSRATN  660
TLMCSQGIDG HKEMEGGRHF KF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-41	FAR1 family protein