PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028107637.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 250aa MW: 27626 Da PI: 6.5066 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.6 | 1.3e-17 | 66 | 116 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+G+r++ +++Wv+e+r+p +k+ r++lg++ tae+Aa+a++ a+++l+g XP_028107637.1 66 PVYRGIRRRN-TNKWVCELREP---NKKSRIWLGTYPTAEMAARAHDVAALALKG 116 68*****887.9*********8...347************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MSSMDTSSTC SDPYLFRSNF QNSPLSESDA CTRQGATHSD GETIILASSR PKKRAGRKKF 60 KETRHPVYRG IRRRNTNKWV CELREPNKKS RIWLGTYPTA EMAARAHDVA ALALKGQLAC 120 LNFADSVWKL PVPVSKDAKD IRSAAVEAAE AFRPSDHLCN DNTGSRVEEK ILSDGVSGTK 180 VCHDGASSSN GTRDNVCHMD EEEEKDAIFD MQGLILGMAD GPLLSPPPCL GARFNWDDVE 240 TEIDVSLWTY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51990.1 | 2e-55 | ERF family protein |