PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028107506.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | WRKY | ||||||||
Protein Properties | Length: 577aa MW: 63049.6 Da PI: 6.5784 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.1 | 1.2e-30 | 330 | 388 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ XP_028107506.1 330 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTILITTYEGNHNHP 388 7***************************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 577 aa Download sequence |
MAKGSGLSFD SDRIGYFFYQ PTVINSFPED TTTNHRYHHH NHHHPKLKLE PMEATTPTIK 60 FPVNLNSTTH DEQDVPTPSH DDKRRVIDEM DFFAHDKHHH SKAAATTGVE NDLPRPAQLD 120 FNVNTGLHLL TAANNTGSDE SMVDDETSPN SEDKRAKTEL TVVQAELKRM NTENQRLRDM 180 LDQVTGNYTT LQIHMMTLMQ QKHNNNEKHD QNNMVVDDKS EENNKKHSGN NGGGVMVPRQ 240 FMDLGLAATA DTDEHSLSSS EGRRSPVNNG EAASKEGDDG VREDSPENGS NNKVARLNGL 300 KNVDQAAPTE ATMRKARVSV RARSEAPMIT DGCQWRKYGQ KMAKGNPCPR AYYRCTMAAG 360 CPVRKQVQRC AEDRTILITT YEGNHNHPLP PAAMAMASTT SSAAQMLLSG SMSSADGLIN 420 SNFIARTLLP CSSNMATISA SAPFPTVTLD LTQSPNNPLQ FQRQQPQTQF HIPFPNPPPH 480 NNNLIGQALY NQSKFSGLQM SSHDMEAAQF GRQALPQSSV ADTVNALTAD PNFTAALAAA 540 ISSLIGGGGS SNNNASVATT TTSNNNSNDN NSSFPEK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G62300.1 | 1e-121 | WRKY family protein |