PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028107378.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family SBP
Protein Properties Length: 388aa    MW: 43124.2 Da    PI: 8.5564
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028107378.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP128.13.4e-4091167278
                     -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     C v+gC adls+++eyhrrh+vCe hsk+pvv+v g+eqrfCqqCsrf +l efDeekrsCr+rL++hn+rrrk+q+
  XP_028107378.1  91 CLVDGCIADLSNCREYHRRHRVCERHSKTPVVIVGGKEQRFCQQCSRFQSLGEFDEEKRSCRKRLDGHNRRRRKPQP 167
                     **************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
MDWELKASGW DFTDFGREDD TRLATLVGSS SLGVHKNGRG FSVDLKLGGL GDLGDGSIDK  60
LKEPGGSTIA SSPSGSLKRT RAINGTQNVS CLVDGCIADL SNCREYHRRH RVCERHSKTP  120
VVIVGGKEQR FCQQCSRFQS LGEFDEEKRS CRKRLDGHNR RRRKPQPEAF YMSSGSFLSN  180
HQGVRLLNFT GPQAYTTSTT GAVPTWPRVS EYHQDLHVVN QQSTTPNTLG CVYNGGDKRF  240
PFLLANEPER SSNQAVPEFS ICQRLLNNRA SPERGRGFQK ILSDGFAQSV NSKLALSLLS  300
SNRTQNSETS LTHILQRDMI HLNQPMGMSF QFDGLAQYSR SQGVVEEKPP VLVPQGSNTN  360
NLCNEIFQVA PYDFLEEGAS QVIPFSWK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1148165KRSCRKRLDGHNRRRRKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50670.11e-46SBP family protein