PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028107303.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TALE

Protein Properties

Length: 298aa MW: 33661.1 Da PI: 6.7553

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028107303.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.2	1.2e-07	247	280	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++++L +++gL+ +q+ +WF N+R + XP_028107303.1 247 KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 280 469*****************************87 PP
2	ELK	26.6	1.4e-09	201	222	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L++++++++ ++++E++ XP_028107303.1 201 ELKVELKQGFRSRIEDVREEIL 222 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MQEQGLAMMG GGGGGGIGGL TDISVFSGAQ NTQLKAEIAT NPLYEQLLAA HVACLRVATP 60 IDQLPLIDAQ LSQSHHLLRS YASQHHHHNH PLSPHERQEL DNFLAQYMLV LCSFKEQLQQ 120 HVRVHAVEAV MACREIEQNL QVLTGVSLGE GTGATMSDDE DELQMDFSLD QFGGDGHDMM 180 GFGPLIPTES ERSLMDRVRQ ELKVELKQGF RSRIEDVREE ILRKRRAGKL PGDTTSVLKN 240 WWQQHAKWPY PTEDDKAKLV EETGLQLKQI NNWFINQRKR NWHSNSQSVT ALKSKRKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	278	298	RKRNWHSNSQSVTALKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62990.1	1e-159	TALE family protein