PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028107295.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family WRKY
Protein Properties Length: 363aa    MW: 40371.9 Da    PI: 7.5437
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028107295.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.37.5e-29163221259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      D ++WrKYGqK++kg+++pr+YYrC+++ gC ++k+ve+s +dp++ ++ Y+geH+h+
  XP_028107295.1 163 ADSWAWRKYGQKPIKGTPNPRNYYRCSTSkGCAARKQVEKSPSDPNIYVVYYSGEHTHP 221
                     79************************9988****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
MADEWDLRAV VKRPTTAAIN TTQFNNTTIE NPLPDFSSLS FQNNDPPFDY PPLAHQPSFQ  60
FQGLEEIYKD FNSQPPPPPP PPINPTYAVP FFGGLVNQQP QLLPPPPPPP PLPQIPQQQQ  120
LMQPLFNNNS LTGSSSQTGG RYRKRKNHQT KLVRQMTREE LLADSWAWRK YGQKPIKGTP  180
NPRNYYRCST SKGCAARKQV EKSPSDPNIY VVYYSGEHTH PRPTQRNSLA GTTRNKLSNK  240
LRKPISGEAP PPSAAIVPNP SCSSSSPVSA ASSFSPSTPL MEGESVPHDN TQSQPPQNNN  300
NNNGYDEMEE DSENDDDILI PNILMSEDII KGFQELSRGY PGFNGLDSRY DIGGKFSTRF  360
PAP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.15e-45WRKY family protein