PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028106981.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 336aa    MW: 36861 Da    PI: 5.7553
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028106981.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.91.5e-19120169255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr+++ +g+W+AeIrdp     r  r++lg+++taeeAa  +++a+ +l+g
  XP_028106981.1 120 KFRGVRQRP-WGKWAAEIRDPL----RrVRVWLGTYDTAEEAAMVYDNAAIQLRG 169
                     89*******.**********72....45*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MDRTMLCPVK YSEHTHRTTM ATTSPPATLS GQMRPKIVRI SVTDADATDS SSDEEDGLFR  60
RNRVKRFVNE VTIKSCSRDT NSNGDCKTRR LSAAGSTTNR RRKKSAGKLQ HTAARFTGRK  120
FRGVRQRPWG KWAAEIRDPL RRVRVWLGTY DTAEEAAMVY DNAAIQLRGP DALTNFATPP  180
KTAPTVPPGI KTASLCSGYN SGEESHTNNN LLSPTSVLRF QSEAPNDEAE SNHVVVGGGG  240
ESRDLKDGDI SVSARFADFS PLDKFFPDDM FGLQDPVSDL FVDSGLKENI FGEDFGDLIV  300
GLGDDFGFGQ SIGPIDDYFQ FQDIGDIFGS DTLVAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.11e-53ERF family protein