PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028106960.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 209aa MW: 24666.2 Da PI: 7.3246 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 92.6 | 1.9e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien+snrqvt+skRrngi+KKA+E+ vLCda+v+++if+s+gk++ey+s XP_028106960.1 9 KRIENSSNRQVTYSKRRNGIMKKAKEITVLCDAQVSLVIFASSGKMHEYCS 59 79***********************************************96 PP | |||||||
2 | K-box | 80.5 | 4.1e-27 | 71 | 169 | 1 | 99 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 y+k+sg++l++ak+e+l+ el+++kke++++q e+Rhl+Ged++sL +keL+ +e++Le++l ++R+k++e++ ++ ++ ++ e+e+++ n +L+ XP_028106960.1 71 YHKQSGERLWDAKHENLSIELDRIKKENDSMQIELRHLKGEDITSLHHKELMAIEEALENGLGSVREKQMEYIDMMEKNKKMLEEENKHLNFMLH 165 8999******************************************************************************************* PP K-box 96 kkle 99 ++ + XP_028106960.1 166 QQEM 169 9975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MGRGKIEIKR IENSSNRQVT YSKRRNGIMK KAKEITVLCD AQVSLVIFAS SGKMHEYCSP 60 STTLVDILDK YHKQSGERLW DAKHENLSIE LDRIKKENDS MQIELRHLKG EDITSLHHKE 120 LMAIEEALEN GLGSVREKQM EYIDMMEKNK KMLEEENKHL NFMLHQQEMN MESSREMENG 180 YHQRVRDFQS QMPFAFRVQP IQPNLQERI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G20240.1 | 6e-81 | MIKC_MADS family protein |