PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028106804.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 247aa MW: 27449.6 Da PI: 8.8131 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.7 | 9e-16 | 55 | 103 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + GVr+++ +grWvAeI+d s ++ r +lg+f+ aeeAa a++ a++ l+g XP_028106804.1 55 FLGVRQRP-SGRWVAEIKDSS---QKLRLWLGTFDRAEEAAMAYDSAARLLRG 103 67******.7*********42...36***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MDTKESSQSQ EVLFQSQNPC TNHPSMAHES QNFQENGERK ILNLPKRGNN HERRFLGVRQ 60 RPSGRWVAEI KDSSQKLRLW LGTFDRAEEA AMAYDSAARL LRGRNAKTNF TYHGIMTTHE 120 ENCNLLGKNP RLYQLLQHAI MKNISKPSSF TNKSVDSPIL WRGDHNRGGG VEDGSINFDT 180 LVEETIVCSS SCGDGFGCYG SQSQDKDKIC SLSLGSSRVY SSVIVAPSFG QGSSVSKSLS 240 SPVFRHS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 1e-18 | ERF family protein |