PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028106747.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 441aa MW: 50578.9 Da PI: 5.0835

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028106747.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.3	1.3e-23	78	168	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 +fYn+Y+ +vGFs++k + +k+k+++eit+rtfvC+keg+r +k++ + +r+e r+gC+a++ +k+++ gk++ ++++++HnH+l+p XP_028106747.1 78 DFYNTYGGKVGFSIKKLYAHKNKHTKEITSRTFVCYKEGTRGIDKRD-PLVKFPRQEVRCGCRARFSIKLDRnLGKYVAIDFVEHHNHDLVP 168 6*****************************************999.88999**************989*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MVDGVDGNGE RLAEGRESGG DATMAEGCES GCDATMADGR ESGCDEVIEE NNVVNELANC 60 GWKPKLGMSF DSEQAAYDFY NTYGGKVGFS IKKLYAHKNK HTKEITSRTF VCYKEGTRGI 120 DKRDPLVKFP RQEVRCGCRA RFSIKLDRNL GKYVAIDFVE HHNHDLVPQE CIHMLPSQRK 180 ISTTQAIEVE LAAESGIPLR SAYELFGRES GGRASLGFTK LDQKNYLRSK RQKDLEYGEA 240 GSVLQYFRKK SLENPSFYYA VQLDCEEQIS NIFWADAQMI MDYAQFGDVV TFDTTYKLNN 300 EHRPFETFVG FNHHRETVVF GAALMHDETA ESFTWLFQIF LEYVSSLFED VSVKGVFSKF 360 MHKIDDEEEF RIPWDQMLDR YDAHNNHWLK QTFGVKDKWG WPYIMNSWVF SLDLCFFERI 420 QLITVAVTVT VTGENTVTVM E

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MVDGVDGNGE RLAEGRESGG DATMAEGCES GCDATMADGR ESGCDEVIEE NNVVNELANC  60
GWKPKLGMSF DSEQAAYDFY NTYGGKVGFS IKKLYAHKNK HTKEITSRTF VCYKEGTRGI  120
DKRDPLVKFP RQEVRCGCRA RFSIKLDRNL GKYVAIDFVE HHNHDLVPQE CIHMLPSQRK  180
ISTTQAIEVE LAAESGIPLR SAYELFGRES GGRASLGFTK LDQKNYLRSK RQKDLEYGEA  240
GSVLQYFRKK SLENPSFYYA VQLDCEEQIS NIFWADAQMI MDYAQFGDVV TFDTTYKLNN  300
EHRPFETFVG FNHHRETVVF GAALMHDETA ESFTWLFQIF LEYVSSLFED VSVKGVFSKF  360
MHKIDDEEEF RIPWDQMLDR YDAHNNHWLK QTFGVKDKWG WPYIMNSWVF SLDLCFFERI  420
QLITVAVTVT VTGENTVTVM E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-69	FAR1 family protein