PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028106713.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WRKY

Protein Properties

Length: 364aa MW: 39755.8 Da PI: 5.0625

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028106713.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.2	4.4e-30	129	190	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK++ g+++pr+YYrCt++ gC ++k+v+rs+edp+++eitY+g+H+++ XP_028106713.1 129 LDDGYSWRKYGQKDILGAKYPRGYYRCTHRnvqGCLATKQVQRSDEDPTIFEITYRGRHTCT 190 59*************************98999************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MENSPGWEQK TLINELARGK ELAKQLQNNL TSSSHETCEL LIHNILNSYD KALSMLKWNG 60 SVAGEPQLTG AAMGITSESP SLCGSPHSED SDRDLKDHEH KDGSRKRKST PRWTQQVQVC 120 PGTGLEGPLD DGYSWRKYGQ KDILGAKYPR GYYRCTHRNV QGCLATKQVQ RSDEDPTIFE 180 ITYRGRHTCT PQPPPPPEKQ EQPPNTTLDN PPPPPPQQQQ QSLETLLNFQ TGLKVITEDL 240 ETPNNNQTLP FFYFPSTSQE NCNVHLHSPS MGNFSDPSFI SPATSGTSYF SLSPSPTGTG 300 MAGFGGNQSL DGSDQSELAK IVAAAAAVTS SAATSPTAGL DFPFGSMDQF EPSFSFDNNP 360 GFIN

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MENSPGWEQK TLINELARGK ELAKQLQNNL TSSSHETCEL LIHNILNSYD KALSMLKWNG  60
SVAGEPQLTG AAMGITSESP SLCGSPHSED SDRDLKDHEH KDGSRKRKST PRWTQQVQVC  120
PGTGLEGPLD DGYSWRKYGQ KDILGAKYPR GYYRCTHRNV QGCLATKQVQ RSDEDPTIFE  180
ITYRGRHTCT PQPPPPPEKQ EQPPNTTLDN PPPPPPQQQQ QSLETLLNFQ TGLKVITEDL  240
ETPNNNQTLP FFYFPSTSQE NCNVHLHSPS MGNFSDPSFI SPATSGTSYF SLSPSPTGTG  300
MAGFGGNQSL DGSDQSELAK IVAAAAAVTS SAATSPTAGL DFPFGSMDQF EPSFSFDNNP  360
GFIN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	104	109	SRKRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11070.1	4e-57	WRKY family protein