PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028106667.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | GRAS | ||||||||
Protein Properties | Length: 471aa MW: 52916.7 Da PI: 5.9974 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 462.7 | 2.2e-141 | 46 | 468 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 l++lLl+ A++v++g+le+a+ +L ++s+lasp+gd+mqR+aayfteALa+r+++ +++lykal++++ s +see+ ++klf+e++P+lk+++ XP_028106667.1 46 LIHLLLASANHVATGSLENANITLDQISQLASPEGDTMQRIAAYFTEALAERILKGWPGLYKALHSTRIS--LVSEEILVRKLFFELFPFLKVAF 138 689*************************************************************999887..7********************** PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190 +++NqaI ea+ege++vHiiD+++ +++QW aL++ L++Rpegpp+lRiTgv++ +ke le++++ L++ A++l++pf+fn v++++edl+ XP_028106667.1 139 VITNQAIIEAMEGEKMVHIIDLNAAEPAQWGALIKDLSARPEGPPHLRITGVHQ----QKEVLEQMAHILTEEADRLDIPFQFNQ-VVSKVEDLD 228 ******************************************************....9**************************.799****** PP GRAS 191 leeLrvkpgEalaVnlvlqlhrll......................................................desvsles..erdevLk 229 +e+Lrvk+gEala+++vlqlh+ll ++++sl+ + d++L+ XP_028106667.1 229 IEKLRVKTGEALAISSVLQLHTLLanndelrkksamtpnnangvnlqrtlqmnqrtlgellekdlvngysptshdsasSSPLSLNTsaRMDSFLN 323 ***************************************************************************99955555554558999*** PP GRAS 230 lvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGF 324 ++++lsPkv+vv+eq+++hn+++++er+leal++y+alfd+le++lp++s er kvE++l+g+ei+++++ egaer++rhe+lekW +rle aGF XP_028106667.1 324 ALWGLSPKVMVVTEQDSNHNGSTLMERLLEALYFYAALFDCLESTLPKTSLERLKVEKMLFGEEIKDIITSEGAERKKRHEKLEKWIQRLELAGF 418 *********************************************************************************************** PP GRAS 325 kpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 ++vpls++a+ qa++ll+ ++ dgyr++ee+g++v +W+dr+L+svSaWr XP_028106667.1 419 GSVPLSYYAMLQARRLLQSYSCDGYRIKEENGCVVVCWQDRSLFSVSAWR 468 *************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 471 aa Download sequence |
MFQDDGSSSI TSTPLQAFPI MSLSPGFGSA YPWLKELKSE DRGLYLIHLL LASANHVATG 60 SLENANITLD QISQLASPEG DTMQRIAAYF TEALAERILK GWPGLYKALH STRISLVSEE 120 ILVRKLFFEL FPFLKVAFVI TNQAIIEAME GEKMVHIIDL NAAEPAQWGA LIKDLSARPE 180 GPPHLRITGV HQQKEVLEQM AHILTEEADR LDIPFQFNQV VSKVEDLDIE KLRVKTGEAL 240 AISSVLQLHT LLANNDELRK KSAMTPNNAN GVNLQRTLQM NQRTLGELLE KDLVNGYSPT 300 SHDSASSSPL SLNTSARMDS FLNALWGLSP KVMVVTEQDS NHNGSTLMER LLEALYFYAA 360 LFDCLESTLP KTSLERLKVE KMLFGEEIKD IITSEGAERK KRHEKLEKWI QRLELAGFGS 420 VPLSYYAMLQ ARRLLQSYSC DGYRIKEENG CVVVCWQDRS LFSVSAWRCR R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50420.1 | 0.0 | GRAS family protein |