PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028106559.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 407aa MW: 46438 Da PI: 7.2305

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028106559.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160.3	7.4e-50	26	150	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +pGfrFhPt+eel+ +yL++kvegk++++ e i+ +d+y+++Pw+Lp++++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ + + + XP_028106559.1 26 MPGFRFHPTEEELIEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPAMAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRT-E 118 79*************************.89***********888889***********************************9.8 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +glkktLvfy+g+apkg +t+W+m+eyrl XP_028106559.1 119 NRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRL 150 999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MAIAATMSQD NNSKDDHDEH DHDLVMPGFR FHPTEEELIE FYLRRKVEGK RFNVELITFL 60 DLYRYDPWEL PAMAAIGEKE WFFYVPRDRK YRNGDRPNRV TTSGYWKATG ADRMIRTENR 120 SIGLKKTLVF YSGKAPKGIR TSWIMNEYRL PHHETERLQK AEISLCRVYK RPGVEDHPSL 180 PRSLPTRASS SRTTQFDKKQ HGTPNYASID SFQAFGGQSQ VDDTEKLSET STSSSADIGT 240 ALGLSKHNSY IALASMTSSL APPQASIEDD GFLLQQQSKQ ALSLVPNCTT VYAGSSLVPQ 300 YAVDDLHRLV NFQQASISQQ YQNHHYQYHP AQLSPPLPPQ LQSLPPLNMP PSSLQASFPE 360 RLWEWNSITE GNKDYTNHFK FGRVQYITEV ITASQPMVTC SIFSREF

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MAIAATMSQD NNSKDDHDEH DHDLVMPGFR FHPTEEELIE FYLRRKVEGK RFNVELITFL  60
DLYRYDPWEL PAMAAIGEKE WFFYVPRDRK YRNGDRPNRV TTSGYWKATG ADRMIRTENR  120
SIGLKKTLVF YSGKAPKGIR TSWIMNEYRL PHHETERLQK AEISLCRVYK RPGVEDHPSL  180
PRSLPTRASS SRTTQFDKKQ HGTPNYASID SFQAFGGQSQ VDDTEKLSET STSSSADIGT  240
ALGLSKHNSY IALASMTSSL APPQASIEDD GFLLQQQSKQ ALSLVPNCTT VYAGSSLVPQ  300
YAVDDLHRLV NFQQASISQQ YQNHHYQYHP AQLSPPLPPQ LQSLPPLNMP PSSLQASFPE  360
RLWEWNSITE GNKDYTNHFK FGRVQYITEV ITASQPMVTC SIFSREF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.1	1e-113	NAC family protein