PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028106507.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

ERF

Protein Properties

Length: 422aa MW: 45293.4 Da PI: 6.8042

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028106507.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	64.7	1.9e-20	200	249	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp + +r++lg+f+tae Aa+a+++a+++++g XP_028106507.1 200 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 249 7******.******7.....337***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MCLTKVANPR DSGEYVRFPT TDTADDGGAD HPILSSAAVA RERSVMVTAL TNVVSGGQRL 60 GDGGGEWGYR AEMGGGGGGT SSFVGGSGGI YSANSPTSPY SSSSSGSWAG QKRGREEESV 120 TQYSSEQQLH RVYRGFISDF RGSHGGESSS VTTTAEEPTN IVTATTPTTI TITATATATT 180 PPTPTTEAAS NEEGGERRRR YRGVRQRPWG KWAAEIRDPH KAARVWLGTF DTAEAAARAY 240 DEAALRFRGN RAKLNFPENV RLLPPPQHPP ATQLPISNSP ATHLAAPPPP PPFFQTHHQF 300 QPNIARDYWQ YSQLLQSTGD LNFHALQLQQ QQQQQQQQQN SLLDQMFYAS SLAGLDAQTL 360 VSSSPSFASS SVTSATSSYP LFFSDQQQLG YFRPPGPQNQ GGGSDFPAPP WTGSGQYPPS 420 SS

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MCLTKVANPR DSGEYVRFPT TDTADDGGAD HPILSSAAVA RERSVMVTAL TNVVSGGQRL  60
GDGGGEWGYR AEMGGGGGGT SSFVGGSGGI YSANSPTSPY SSSSSGSWAG QKRGREEESV  120
TQYSSEQQLH RVYRGFISDF RGSHGGESSS VTTTAEEPTN IVTATTPTTI TITATATATT  180
PPTPTTEAAS NEEGGERRRR YRGVRQRPWG KWAAEIRDPH KAARVWLGTF DTAEAAARAY  240
DEAALRFRGN RAKLNFPENV RLLPPPQHPP ATQLPISNSP ATHLAAPPPP PPFFQTHHQF  300
QPNIARDYWQ YSQLLQSTGD LNFHALQLQQ QQQQQQQQQN SLLDQMFYAS SLAGLDAQTL  360
VSSSPSFASS SVTSATSSYP LFFSDQQQLG YFRPPGPQNQ GGGSDFPAPP WTGSGQYPPS  420
SS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	196	201	ERRRRY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50080.1	1e-15	ERF family protein