PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028106506.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

ERF

Protein Properties

Length: 422aa MW: 45326.5 Da PI: 6.8683

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028106506.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	64.7	1.9e-20	201	250	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp + +r++lg+f+tae Aa+a+++a+++++g XP_028106506.1 201 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 250 7******.******7.....337***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MCLTKVANPR DSGEYVRFPT TDTADDGGAD HPILSSAAVA RERSVMVTAL TNVVSGGQRL 60 GDGGGEWGYR AEMGGGGGGT SSFVGGSGGI YSANSPTSPY SSSSSGSWAG QKRGREEESV 120 TQYSSEQQLH RVYRGFISDF RGSHGGESSS VTTTAAEEPT NIVTATTPTT ITITATATAT 180 TPPTPTTEAA SNEEGGERRR RYRGVRQRPW GKWAAEIRDP HKAARVWLGT FDTAEAAARA 240 YDEAALRFRG NRAKLNFPEN VRLLPPPQHP PATQLPISNS PATHLAAPPP PPPFFQTHHQ 300 FQPNIARDYW QYSQLLQSTG DLNFHALQLQ QQQQQQQQQQ NSLLDQMFYA SSLAGLDAQT 360 LVSSSPSFAS SSVTSATSSY PLFFSDQQQL GYFRPPGPQN QGGGSDFPAP PWTGSGKHSQ 420 DI

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MCLTKVANPR DSGEYVRFPT TDTADDGGAD HPILSSAAVA RERSVMVTAL TNVVSGGQRL  60
GDGGGEWGYR AEMGGGGGGT SSFVGGSGGI YSANSPTSPY SSSSSGSWAG QKRGREEESV  120
TQYSSEQQLH RVYRGFISDF RGSHGGESSS VTTTAAEEPT NIVTATTPTT ITITATATAT  180
TPPTPTTEAA SNEEGGERRR RYRGVRQRPW GKWAAEIRDP HKAARVWLGT FDTAEAAARA  240
YDEAALRFRG NRAKLNFPEN VRLLPPPQHP PATQLPISNS PATHLAAPPP PPPFFQTHHQ  300
FQPNIARDYW QYSQLLQSTG DLNFHALQLQ QQQQQQQQQQ NSLLDQMFYA SSLAGLDAQT  360
LVSSSPSFAS SSVTSATSSY PLFFSDQQQL GYFRPPGPQN QGGGSDFPAP PWTGSGKHSQ  420
DI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	197	202	ERRRRY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50080.1	1e-15	ERF family protein